Gene CPF_1535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1535 
Symbol 
ID4203227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1752378 
End bp1753274 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content31% 
IMG OID638082413 
Productputative lipid kinase 
Protein accessionYP_695978 
Protein GI110801344 
COG category[I] Lipid transport and metabolism
[R] General function prediction only 
COG ID[COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 
TIGRFAM ID[TIGR00147] lipid kinase, YegS/Rv2252/BmrU family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0290428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGGGTA AGACATTGAA GAAAGTAAGA TTTATATATA ACCCATATTC GGGAGAGAAT 
GCTATTTTAA AGGAACTTGA TAAAATAATC ACTATGCATC AGGATAAGGG ATATACTATA
GTTCCCTATA GAATTCAAAG GGGAGTAGAT GTAATAAATG CTCTAGATAT AGTAGATTCT
ACTTATGAAT ACATACTTAT TGCAGGTGGA GATGGAACTA TAGACACTGT TGTAAATGCT
ATGAAAAAAA GAGGAATAGA AATTCCAATA GGAATTATTC CAGTGGGAAC AGCAAATGAC
TTTGCAAAAC ATTTAGGTAT GCCTCAAGAT GCAGGTGCAT GTGTTGAGCA AATATTAGAT
TCTTATGCAG TTGGAGTAGA CCTAGGTAAG GTAAATGATA ATTACTTTGT AAATGTATTA
TCTACAGGAT TATTTACTGA TGTATCTCAA AAAACAGATA CAAATTTAAA AAATACAATA
GGTAAATTAG CATATTATTT AAAAGGTTTA GAAGAATTGC CTAACTTTAG AAAACTAGAT
GTTAAAATAA CTGCTAATGG CAAGGTGTTT AATGAGCCTA TATATTTAAT GCTTGTGTTT
AATGGTCAAA CAGCAGGAAA CTTTAAATTA GCAACTAAGG CTAAGGTTCA GGATGGACTT
TTAGATATAG TTATATTTAA GGCTTGTCAT ATTCCAGAAT TAATACCTAT GTTTATAAAG
GTATTAAAGG GAGAACACTT AGAAGATTCT AGAATTGAGT ATATAAGAAC AGATGAGCTT
CTTATAGAAT CTGATGAGGA AATAGTTACA GATATAGATG GAGAGAGAGG GCCAGATTTC
CCATTAAGAG TTCAATGTAT TAAAGATGGA ATACAAGTTT TAGGAATAAA TAAGTAA
 
Protein sequence
MEGKTLKKVR FIYNPYSGEN AILKELDKII TMHQDKGYTI VPYRIQRGVD VINALDIVDS 
TYEYILIAGG DGTIDTVVNA MKKRGIEIPI GIIPVGTAND FAKHLGMPQD AGACVEQILD
SYAVGVDLGK VNDNYFVNVL STGLFTDVSQ KTDTNLKNTI GKLAYYLKGL EELPNFRKLD
VKITANGKVF NEPIYLMLVF NGQTAGNFKL ATKAKVQDGL LDIVIFKACH IPELIPMFIK
VLKGEHLEDS RIEYIRTDEL LIESDEEIVT DIDGERGPDF PLRVQCIKDG IQVLGINK