Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1535 |
Symbol | |
ID | 4203227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1752378 |
End bp | 1753274 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638082413 |
Product | putative lipid kinase |
Protein accession | YP_695978 |
Protein GI | 110801344 |
COG category | [I] Lipid transport and metabolism [R] General function prediction only |
COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0290428 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGGGTA AGACATTGAA GAAAGTAAGA TTTATATATA ACCCATATTC GGGAGAGAAT GCTATTTTAA AGGAACTTGA TAAAATAATC ACTATGCATC AGGATAAGGG ATATACTATA GTTCCCTATA GAATTCAAAG GGGAGTAGAT GTAATAAATG CTCTAGATAT AGTAGATTCT ACTTATGAAT ACATACTTAT TGCAGGTGGA GATGGAACTA TAGACACTGT TGTAAATGCT ATGAAAAAAA GAGGAATAGA AATTCCAATA GGAATTATTC CAGTGGGAAC AGCAAATGAC TTTGCAAAAC ATTTAGGTAT GCCTCAAGAT GCAGGTGCAT GTGTTGAGCA AATATTAGAT TCTTATGCAG TTGGAGTAGA CCTAGGTAAG GTAAATGATA ATTACTTTGT AAATGTATTA TCTACAGGAT TATTTACTGA TGTATCTCAA AAAACAGATA CAAATTTAAA AAATACAATA GGTAAATTAG CATATTATTT AAAAGGTTTA GAAGAATTGC CTAACTTTAG AAAACTAGAT GTTAAAATAA CTGCTAATGG CAAGGTGTTT AATGAGCCTA TATATTTAAT GCTTGTGTTT AATGGTCAAA CAGCAGGAAA CTTTAAATTA GCAACTAAGG CTAAGGTTCA GGATGGACTT TTAGATATAG TTATATTTAA GGCTTGTCAT ATTCCAGAAT TAATACCTAT GTTTATAAAG GTATTAAAGG GAGAACACTT AGAAGATTCT AGAATTGAGT ATATAAGAAC AGATGAGCTT CTTATAGAAT CTGATGAGGA AATAGTTACA GATATAGATG GAGAGAGAGG GCCAGATTTC CCATTAAGAG TTCAATGTAT TAAAGATGGA ATACAAGTTT TAGGAATAAA TAAGTAA
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Protein sequence | MEGKTLKKVR FIYNPYSGEN AILKELDKII TMHQDKGYTI VPYRIQRGVD VINALDIVDS TYEYILIAGG DGTIDTVVNA MKKRGIEIPI GIIPVGTAND FAKHLGMPQD AGACVEQILD SYAVGVDLGK VNDNYFVNVL STGLFTDVSQ KTDTNLKNTI GKLAYYLKGL EELPNFRKLD VKITANGKVF NEPIYLMLVF NGQTAGNFKL ATKAKVQDGL LDIVIFKACH IPELIPMFIK VLKGEHLEDS RIEYIRTDEL LIESDEEIVT DIDGERGPDF PLRVQCIKDG IQVLGINK
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