| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1532 |
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| Symbol | |
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| ID | 4202114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1750111 |
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| End bp | 1750752 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 638082410 |
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| Product | His/Glu/Gln/Arg/opine ABC transporter permease |
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| Protein accession | YP_695975 |
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| Protein GI | 110800931 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000958136 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAATTATA TTATTACTTT AATGCCCTCA ATAATAGAAG GCTTAAAAAA TACATTAGGT
GTTTTTATAT TAACACTACT TTTATCTATT CCTTTAGGAA TAATAGTTGC AATACTTAGA
TTATCAAATA TTAAAATAGT AAACTTTATA TCATCTTTAT ATGTTTTAGT TATGCGTGGA
ACCCCTTTAT TATTACAACT AATATTTATA TTTTTTGGAC TACCAATAAT AGGAGTTAGC
ATAGATAGAT TCCCAGCTGC CATAATAGCA TTCACCTTAA ATTACGCAGC TTATTTTGGC
GAAATATTTA GGTCTGGTAT AAAAGATATT GATAGAGGAC AATTTGAAGC AAGTAAAATC
CTAGGTCTTT CAAAATGGTT TACCTTTAAA AAGATAATTC TTCCTCAATC ATTTAAAAAG
ACTTTGCCTT CAATTGCTAA TGAAGTTATT ACTTTAGTTA AAGATACATC CTTAGTTTAT
GTAGTTGGCA TAGGTGAACT TTTAAGAGCT GGTAAAATTG CAAGTAACAG AGACGCTTCT
CTCCTTCCCT TGTTTTTAAT AGGCATAATA TATCTACTGT TAATAGGAAT TCTAACTAAA
ATATTTAATA GGTTAGAGAA AAAATATTCA TATTATAATT AG
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| Protein sequence | MNYIITLMPS IIEGLKNTLG VFILTLLLSI PLGIIVAILR LSNIKIVNFI SSLYVLVMRG
TPLLLQLIFI FFGLPIIGVS IDRFPAAIIA FTLNYAAYFG EIFRSGIKDI DRGQFEASKI
LGLSKWFTFK KIILPQSFKK TLPSIANEVI TLVKDTSLVY VVGIGELLRA GKIASNRDAS
LLPLFLIGII YLLLIGILTK IFNRLEKKYS YYN
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