Gene CPF_1525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1525 
Symbolnth 
ID4203704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp1743409 
End bp1744038 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content30% 
IMG OID638082403 
Productendonuclease III 
Protein accessionYP_695968 
Protein GI110800037 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000000771043 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA GAACTAAAGA GGTATTAGAA ATATTAAAAG AAGAGTATCC AGATGCTAAA 
TGTGAGCTAA ATTATGAAAC TCCCTTTCAA CTTTTAGTTG CTACTATTTT ATCAGCACAG 
ACTACGGATA AAAAGGTTAA TGAGGTAACT AAAGGGCTTT TTAAAGACTA TCCAGATGTA 
GAATCTTTTT TAACTATAAG TCAAGAGGAA CTAGAGGATA GAATAAAGCA AATAGGACTT 
TATAGAAATA AAGCTAAAAA TTTAATTATG ATGGTTCATC AATTAAAAGA AAATTTTGGT 
GGAGAAGTTC CTAAAACTAT GGAAGGAATA ACTTCTTTAG CTGGGGCTGG AAGAAAAACT 
GCCAATGTGG TTTTATCAAA TTCCTTTGGA GTTCCATCTA TTGCAGTAGA TACTCATGTA 
TTTAGAGTTT CAAATAGAAT TGGCTTAGCA CATTCAGATA ATGTACTTGA AACTGAAAAA 
CAACTTCAAA AAGAATTACC TAAAAAAGAA TGGTCCTTAA CCCATCATCT TTTAATTTTT 
CACGGGAGAA GATGTTGTAT AGCTAGAAAG CCTAAATGTG ATATATGTAA GATAAATAAA 
TACTGTGATT ATTTTAAAAA TAATAGATAA
 
Protein sequence
MKKRTKEVLE ILKEEYPDAK CELNYETPFQ LLVATILSAQ TTDKKVNEVT KGLFKDYPDV 
ESFLTISQEE LEDRIKQIGL YRNKAKNLIM MVHQLKENFG GEVPKTMEGI TSLAGAGRKT 
ANVVLSNSFG VPSIAVDTHV FRVSNRIGLA HSDNVLETEK QLQKELPKKE WSLTHHLLIF 
HGRRCCIARK PKCDICKINK YCDYFKNNR