Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1524 |
Symbol | |
ID | 4201161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1742516 |
End bp | 1743379 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638082402 |
Product | hypothetical protein |
Protein accession | YP_695967 |
Protein GI | 110799407 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00012311 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATA AAACAAAAGG TATAATTTTA ATAACCATAT CAGCACTTAG TTTTGCTCTT ATGAGTACAT TTGTAAAATT ATCCGGTGAT TTACCATCAA TAGAAAAAAG TTTCTTTAGA AACTTAGTTA GTTGTTTTGT GGCATTTTAT TTAGTGAAAA AAGATAATGC CTTACTTTTT GGACACAAGG AAAATAGACT TGCTCTTATA GGACGTTCTG CCTTAGGAAC CTTAGGAATT TGGGCTAATT ACTATGCAAT TGATAGATTA ATATTATCAG ATGCTACTAT TCTTAATAAA TTAAGTCCGT TTTTCGTTAT TATATTTTCT TATTTATTCC TAAAAGAAAA ATTAAAACCA ATTCATATAA TATGTCTTTT AGCTGCATTC TCTGGAGTTT TATTTATAGT TAGACCTTCT GGGAATTTAG CAAGTAACTT TATTCCTGCT ATAATTGGAC TTTGTTCAGC AGCCTTTGCT GGAGGTGCTT ATACCTTTGT TAGATACTTA GGTGGTAAAG AAAAGGGAGC TACTATTGTT TTCTTCTTTT CTTTCTTCTC AATAGTAACT ACTTTTCCTA TTATGTTATT TCAATTTGAA ACCTTTAGCT TAGAACAATT TGTATTTTTA ATTCTTGCAG GGGTTGCCGC TTCTTGTGCT CAATTTGCAT TAACAGCTGC CTATAAATAT GCTCCAGCAA GAGATATTTC AATTTATGAC TATACTCAAG TTATTTTCAC AGCCTTAATA GGCTTTGTAT TATTTGGAGA TATACCAGAT AAAATATCCC TAATAGGATA TGTCTTAATT TTATTAGCAT CTTTTTCTAT ATTTTTATAT AATAAAAAAG AAGCTAGCAA ATAA
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Protein sequence | MNNKTKGIIL ITISALSFAL MSTFVKLSGD LPSIEKSFFR NLVSCFVAFY LVKKDNALLF GHKENRLALI GRSALGTLGI WANYYAIDRL ILSDATILNK LSPFFVIIFS YLFLKEKLKP IHIICLLAAF SGVLFIVRPS GNLASNFIPA IIGLCSAAFA GGAYTFVRYL GGKEKGATIV FFFSFFSIVT TFPIMLFQFE TFSLEQFVFL ILAGVAASCA QFALTAAYKY APARDISIYD YTQVIFTALI GFVLFGDIPD KISLIGYVLI LLASFSIFLY NKKEASK
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