Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1522 |
Symbol | ddl |
ID | 4201484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1738926 |
End bp | 1739831 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638082400 |
Product | D-alanine--D-alanine ligase |
Protein accession | YP_695965 |
Protein GI | 110798856 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0539481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTTG GAGTAATAAT GGGAGGCATT TCTTCAGAAA GAGAGATATC AATACAAAGT GGCAATTCTG TAGTTCATGC CTTAGATAAA GATAAATATG AAGCTATTCC TATAGTTTTA AATGAAAAAG AAGATTTAAT AGAGAAGGTT AAAGGAATTG ATTTTGCTCT TTTAGCTTTA CATGGAAAAT TTGGTGAAGA TGGAACTGTT CAATCTGTTC TTAAAACTTT AGGAATACCA TTTTCAGGAT GTGGTCCATT AAGTAGTGCT ATATGTATGG ATAAGGACAT GACAAAGAGA ATTTTAGCCT TTGGAAATGT TAGAACAGCA AGATGGGTAA TGGTTTCATC AGTAGATGAA ATAGACTATG AAAAAATAGA AAATTTAGGT TATCCAGTAT TTATAAAACC TAATAATGGG GGATCATCAG TTGCTACAAC TTTAGTTGAA TCTAAAGAAG CAGTTAAGGA TGCTGTGTTA GAAGCCTTAA AATATGATAC AGAAGTAATG ATTGAAGAAT ACATTAAAGG TGATGAGATA ACTTGTCCTA TAATTGATGG AAAAATGTTA CCTGTTTTAG CTATAAAACC AAAGGGAAAA TTCTTTGATA TAGCTTCAAA GTATGAAGAT GGAGGAGCAG ATGAATTTAT AGTTAAATTA AATGAAGATC TTCATAAAGA AGTAGAAAAA ATGGCTTTAG AAACTTACAA GTTATTAAAG TGTGATGTAT ATGCTAGGGT AGACATGCTA GTAAAGGATA ATATTCCATA TGTATTAGAA GTAAATACAT TACCTGGTAT GACAAAGAAT AGTTTATTCC CTAAAAGTGC AGCAGGAATA AATATGAGTT TTGAAGAACT TTTAGATACA ATAATAGAAA AATCTTTAAA GGTTAATAGA GAATAA
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Protein sequence | MKVGVIMGGI SSEREISIQS GNSVVHALDK DKYEAIPIVL NEKEDLIEKV KGIDFALLAL HGKFGEDGTV QSVLKTLGIP FSGCGPLSSA ICMDKDMTKR ILAFGNVRTA RWVMVSSVDE IDYEKIENLG YPVFIKPNNG GSSVATTLVE SKEAVKDAVL EALKYDTEVM IEEYIKGDEI TCPIIDGKML PVLAIKPKGK FFDIASKYED GGADEFIVKL NEDLHKEVEK MALETYKLLK CDVYARVDML VKDNIPYVLE VNTLPGMTKN SLFPKSAAGI NMSFEELLDT IIEKSLKVNR E
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