Gene CPF_1521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1521 
Symbol 
ID4203101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1737887 
End bp1738852 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content32% 
IMG OID638082399 
Productglycosy hydrolase family protein 
Protein accessionYP_695964 
Protein GI110801180 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0932253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGATA AAAATCCATT AAGTACATTT GGTCCAGATT TAAATGAATT TAGCAGAGAT 
GTTAATTTCT TAACACTAGC TAAAAATTCA GATTTTATTT ATTTAAGAGC TTCAGGCTCT
GGAACAGGTA AACTAAGAAT TGATAATAAG TTTTTAGAGT TTGCAAAAGA GTGCAGAAGA
TTAGGAATTC CATGTGGTGC ATATCATTTT GCTAAACCTT CTAAGGATTT AGATAGTGCT
GTTATTCAAG CAGATCAATT TATTGATGTT TTGCAACAGG GTTTTGGAGA TGGGGACTAT
GGAGATCTAT TTCCAGTATT AGATGTGGAA ACTCCTACAG ATAAATCCTT AACTACTACA
GAGCTTGTAA ATTGGATTGA TAGATTTAGA GATAGATTTG AAGAAAAAAC TAGAAGAAGA
TTAATGTTAT ATACAGGATT ATTCTTCATA GGTCTCTATG ATGATTTTAA AGTTCCAGGA
AAGGGATACC CTTTAAGTGA TATGCCTTTA TGGATTGCTA TGTACACTAG AATTCCTTCT
AATCCAAGGA TTCCACCAAA TGTTGGAGGA TGGAAGAGAT GGACTATGTG GCAATTTACT
GATGAAGGAA AATTAGATGG AGTTGGAAGT CCGGTAGATT TAAACTGGGG GCCAAATAGC
ATAGATAGTT TAATGCCACC TTCTGCAGTT ACTGGACTAA ACGCATATAT ATCTGGTAAT
AAAATATTTG TTAATTGGAC AGCTAATAAA GAGGATGATT TAAATGGATA TAATGTTTTT
GTAAATGATA ATTATGCAGG AACATTACCA AGAAAAGCAA CTAAAATTGT AATTGATAAA
AGTAGATTTT ATCTTCCAAA AGGAAAGCCA ATAAGAATAT CAATAGAAGC TTTTGATATT
ACTGGAGATT TTTCGAAAGA AAGAACTGAA TATGTTTTAG ATAATAATGG TGAATTCCTA
GGATAG
 
Protein sequence
MQDKNPLSTF GPDLNEFSRD VNFLTLAKNS DFIYLRASGS GTGKLRIDNK FLEFAKECRR 
LGIPCGAYHF AKPSKDLDSA VIQADQFIDV LQQGFGDGDY GDLFPVLDVE TPTDKSLTTT
ELVNWIDRFR DRFEEKTRRR LMLYTGLFFI GLYDDFKVPG KGYPLSDMPL WIAMYTRIPS
NPRIPPNVGG WKRWTMWQFT DEGKLDGVGS PVDLNWGPNS IDSLMPPSAV TGLNAYISGN
KIFVNWTANK EDDLNGYNVF VNDNYAGTLP RKATKIVIDK SRFYLPKGKP IRISIEAFDI
TGDFSKERTE YVLDNNGEFL G