Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1521 |
Symbol | |
ID | 4203101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1737887 |
End bp | 1738852 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638082399 |
Product | glycosy hydrolase family protein |
Protein accession | YP_695964 |
Protein GI | 110801180 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0932253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGATA AAAATCCATT AAGTACATTT GGTCCAGATT TAAATGAATT TAGCAGAGAT GTTAATTTCT TAACACTAGC TAAAAATTCA GATTTTATTT ATTTAAGAGC TTCAGGCTCT GGAACAGGTA AACTAAGAAT TGATAATAAG TTTTTAGAGT TTGCAAAAGA GTGCAGAAGA TTAGGAATTC CATGTGGTGC ATATCATTTT GCTAAACCTT CTAAGGATTT AGATAGTGCT GTTATTCAAG CAGATCAATT TATTGATGTT TTGCAACAGG GTTTTGGAGA TGGGGACTAT GGAGATCTAT TTCCAGTATT AGATGTGGAA ACTCCTACAG ATAAATCCTT AACTACTACA GAGCTTGTAA ATTGGATTGA TAGATTTAGA GATAGATTTG AAGAAAAAAC TAGAAGAAGA TTAATGTTAT ATACAGGATT ATTCTTCATA GGTCTCTATG ATGATTTTAA AGTTCCAGGA AAGGGATACC CTTTAAGTGA TATGCCTTTA TGGATTGCTA TGTACACTAG AATTCCTTCT AATCCAAGGA TTCCACCAAA TGTTGGAGGA TGGAAGAGAT GGACTATGTG GCAATTTACT GATGAAGGAA AATTAGATGG AGTTGGAAGT CCGGTAGATT TAAACTGGGG GCCAAATAGC ATAGATAGTT TAATGCCACC TTCTGCAGTT ACTGGACTAA ACGCATATAT ATCTGGTAAT AAAATATTTG TTAATTGGAC AGCTAATAAA GAGGATGATT TAAATGGATA TAATGTTTTT GTAAATGATA ATTATGCAGG AACATTACCA AGAAAAGCAA CTAAAATTGT AATTGATAAA AGTAGATTTT ATCTTCCAAA AGGAAAGCCA ATAAGAATAT CAATAGAAGC TTTTGATATT ACTGGAGATT TTTCGAAAGA AAGAACTGAA TATGTTTTAG ATAATAATGG TGAATTCCTA GGATAG
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Protein sequence | MQDKNPLSTF GPDLNEFSRD VNFLTLAKNS DFIYLRASGS GTGKLRIDNK FLEFAKECRR LGIPCGAYHF AKPSKDLDSA VIQADQFIDV LQQGFGDGDY GDLFPVLDVE TPTDKSLTTT ELVNWIDRFR DRFEEKTRRR LMLYTGLFFI GLYDDFKVPG KGYPLSDMPL WIAMYTRIPS NPRIPPNVGG WKRWTMWQFT DEGKLDGVGS PVDLNWGPNS IDSLMPPSAV TGLNAYISGN KIFVNWTANK EDDLNGYNVF VNDNYAGTLP RKATKIVIDK SRFYLPKGKP IRISIEAFDI TGDFSKERTE YVLDNNGEFL G
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