| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1509 |
|---|
| Symbol | tpiA |
|---|
| ID | 4201860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 1724426 |
|---|
| End bp | 1725172 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638082387 |
|---|
| Product | triosephosphate isomerase |
|---|
| Protein accession | YP_695952 |
|---|
| Protein GI | 110799000 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0149] Triosephosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACTC CAATAATCGC AGGAAACTGG AAAATGCACT ATACAATAGA CGAGGCTGTT
AAATTAGTTG AAGAATTAAA GCCATTAGTT AAAGATGCTA AATGTGAAGT TGTTGTTTGC
CCAACTTTTG TTTGCTTAGA CGCAGTTAAA AAAGCTGTTG AAGGAACAAA CATAAAAGTA
GGTGCTCAAA ACATGCACTT TGAAGAAAAA GGAGCATTCA CTGGAGAAAT CGCTCCAAGA
ATGTTAGAAG CTATGAACAT AGATTACGTT ATAATTGGAC ATAGTGAAAG AAGAGAATAC
TTCAACGAAA CAGATGAAAC TTGCAACAAA AAAGTTAAAG CTGCTTTCGC ACACAACTTA
ACTCCAATCC TTTGCTGTGG AGAAACTTTA GAGCAAAGAG AAAACGGAAC TACTAACGAC
GTTATAAAAG CTCAAATCAC TGCTGATTTA GAAGGATTAA CTAAAGAGCA AGCTGAGAAA
GTTGTTATAG CTTACGAACC AATCTGGGCT ATCGGAACTG GAAAAACTGC TACTTCAGAC
CAAGCTAATG AAACAATAGC TGCTATAAGA GCTATGGTTG CTGAAATGTT CGGACAAGAA
GTTGCTGATA AAGTAAGAAT CCAATACGGT GGATCAGTTA AGCCTAACAC AATAGCAGAG
CAAATGGCTA AATCAGACAT CGATGGTGCT TTAGTTGGTG GAGCTAGCTT AGTTGCAGCT
GACTTTGCTC AAATCGTAAA CTACTAA
|
|---|
| Protein sequence | MRTPIIAGNW KMHYTIDEAV KLVEELKPLV KDAKCEVVVC PTFVCLDAVK KAVEGTNIKV
GAQNMHFEEK GAFTGEIAPR MLEAMNIDYV IIGHSERREY FNETDETCNK KVKAAFAHNL
TPILCCGETL EQRENGTTND VIKAQITADL EGLTKEQAEK VVIAYEPIWA IGTGKTATSD
QANETIAAIR AMVAEMFGQE VADKVRIQYG GSVKPNTIAE QMAKSDIDGA LVGGASLVAA
DFAQIVNY
|
|---|
| |