Gene CPF_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1500 
Symbol 
ID4200989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp1711478 
End bp1712086 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content29% 
IMG OID638082378 
Productputative lipoprotein 
Protein accessionYP_695943 
Protein GI110798925 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.000964611 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTTT TAAAAGGGGT AATTTTAGCT ATAATTCCAG CATTCTTATT TATGGGATGT 
GGAGAATTTT CTAAAAATGA TGTTGCAAAG GTAAGTTTTG AGAAGCTTTC AGAAAAAGAG 
GAGCAGATTT TAAATTTGAC TGACAATAGA GTTTTTTTCT ATAAGGTGAA AAACATTTCT 
AAAAATAAGG GTTATAGGAT TGATTTAAAT TATGAGGTTT ATAAAGAGGG AAAAGAAGTG 
AAAAATGAAC CGATTTTGAC AAGTGTAAGT GAAACATATG AAAAGGGGAA AGAGAATATA 
ACCTTAGGAA TAAACTTTAA AGATGATAAT AGGATAAATT GTCTTTTAGG TGGAGATGGA 
GCTTATAGTC GTCATAATTA CAAGGCTGAG GAAAATATAA AGGACTATTT TAGTGCTAAT 
TTTGCTGGTG ATTATGATTT AGAGCTTGAA AAAGGAAAGA GAGTTTGTCT TTATTATGCA 
ACTTTAGGAA ATGGAATTAG TAGTAATGTT ATAGGAATGA ACATGGATTC AGAGGAAATA 
AAAGAAACTA TTAATAGAAA TAATGACTGT ATTTTCTTAA GTATAAGTGT AGATGATTTT 
AGTGAGTAG
 
Protein sequence
MRVLKGVILA IIPAFLFMGC GEFSKNDVAK VSFEKLSEKE EQILNLTDNR VFFYKVKNIS 
KNKGYRIDLN YEVYKEGKEV KNEPILTSVS ETYEKGKENI TLGINFKDDN RINCLLGGDG 
AYSRHNYKAE ENIKDYFSAN FAGDYDLELE KGKRVCLYYA TLGNGISSNV IGMNMDSEEI 
KETINRNNDC IFLSISVDDF SE