Gene CPF_1494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1494 
Symbol 
ID4202372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1702097 
End bp1702522 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content29% 
IMG OID638082372 
ProductMarR family transcriptional regulator 
Protein accessionYP_695937 
Protein GI110800452 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00612694 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGAG GAATAAAATT GAATTTATAT GGGCATAAAG TGAATCAACT AGCTAGAAAT 
TTTACTAAGA AATTAAATGA AAAGATTGCT CCTCTTGGGC TATATTCATC ACAGTGGAGT
ATTATATTAT ATTTACATGA AAAGAAACAG TGTACCCAAA TAGAAATAAG TCAATATCTT
GGGGTAGAGG CTCCAACGAT TACTAGGACA TTAACTAAGA TGGAGAAAAT GGGCTTAGTT
ATTAGAACTG AAGGGAAGGA TAAGCGTGAA AGAATTATAA ATTTAACAGA AAAGGCTTAT
GAAATGTTTC CTAAATGGTT TGAAGAAGCC AAGAATATAG AAGTAGAGGC TATAAATAAT
ATTAATAAAG AAGAATTAGA GATTTTTAAT AGTGTTTTAG AGAAAATGAT GAACAATTTA
GATTAA
 
Protein sequence
MKGGIKLNLY GHKVNQLARN FTKKLNEKIA PLGLYSSQWS IILYLHEKKQ CTQIEISQYL 
GVEAPTITRT LTKMEKMGLV IRTEGKDKRE RIINLTEKAY EMFPKWFEEA KNIEVEAINN
INKEELEIFN SVLEKMMNNL D