Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1487 |
Symbol | |
ID | 4201001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1686237 |
End bp | 1689755 |
Gene Length | 3519 bp |
Protein Length | 1172 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638082365 |
Product | putative hyaluronoglucosaminidase |
Protein accession | YP_695930 |
Protein GI | 110801141 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGAAAA AAGGTAACAA ACTTATTGAA TTTGTTAGTA AGATCATGGC TTTTGTTATG GCAGTGACTT TATTATCAAG CTTACCTGTA CAAAATGTAT TAGCTAATGG CAGCAAAGAA ACAAAGGGAG ATGAGTATGA AATCTATCCA ATTCCTCAAA GTATAAAATA TGATAATAGC ATAGTAACTT TAGGGACTGA TGCTAATGTT GTATTTGAAG AAGGAATTGA TGAGGCAACA AAAAACAGAC TATTAGAGGT TTTATCAATT AAGGGAATTA ATCATGAAGA GAGCAATGAA ATAAAAGAAG ATAAGACAAA CTTTCTAATA GGAATAAATA ACTCAGAAGG AGTTGTAGAC AAGTACTTTA CAGATAATAA TTTAGTAAAT GATTCTCATT TTGAAAATCA TGATGCCCAT GTAGTATCAG TTAAGGGAAA TGTAATAGCT GTATTAGGTA AAAATACTGA TTCAGCATTT TATGGTATCA CATCTTTAAA AGCAATATTT AATCAATTAG AAGGAAATGA ATTAAAGGAA TTATTAATTG AGGACTATTC AGATGGTCAA TGGCGTGGTT TTATTGAAGG ATATTATGGA ATTCCTTGGA GCAATGAAAA TCGTAAGGAC TTAATGAAAT TTGGTGGGGA TTTTAAGATG AATTCATACA TCTTTGCACC AAAGGATGAT CAGTATCACA GTCTTAAGTG GAGAGAGCCA TATCCTGCTG AGAAGTTAGC TGAAATAAAG GAAATGGTTG ATGTTGGAAT AGCAACAAAG AATAAATTCA TATGGACAAT ACACCCATTC TTAAAAGATG GTATGAACTT TGGATCAGAA GAGAGTTATA AAGCTGATTT AGAAAAGATA ATAGCTAAGT TTGAACAATT ATATAGTGTG GGAGTACGTC AATTTGGTGT GCTTGCAGAT GATGCTGAGG GAGAAGCTAA TAATCAAGTA AAACTTATGG AAGACTTAGA AAAATGGCGT TTACAAAAAG GTGATGTATA CGAATTTATA TTTGTTCCTA AGGTTTATAC AAAGGAATCA GCTGGTGGAG ATGTTAATAA TGAATACTTA AAAACTATTG GTACAATGCC AGAAACTATT GATATCATGT GGACTGGTGA TGTAATACTT GGTTATGTAA CTCAAGAGAC ATTTGAATTC TTTGAAGAAG CTGTAGGACG TCAAGCCTTT ATGTGGTTAA ACTGGCCAGT AAATGATATT AACAATAAAC GTTTACTAAT GGGTAAGGGT GAGATGTTAG ATCCAACAGT TACAAACTTT AAGGGAATTG TAACAAATCC AATGCAAGAA GCTCAAGCTT CAAAGGTAGC TTTATTTGCT ATAGCTGATT ATGGATGGAA TAGAGCAGAT TTTGATATGG ACAAGAGTTG GAAAGATTCT TTCAAATATA TAGAGCCAGA TGCAAGTGAA GAATTATATA CCTTTGCAAA ACACATGAGT GATCCAGCTC CAAACTGGCA TGGATTATCT TTAGAAGAAT CTGAAGAGTT AAGACCAGTA ATTGAAGAGT TTACAAGAAG ATTATGGGAA AAAGAATCTG TTTTAGATTA CAGTAAGGTT ATTTTAGATG AATATCAAGA GATTTTAGAT GCAACTAATA ATTTTGCAAC TAAATCTAAG AATGAATTAT TAAAGAGTGA AATTAAAGGA TGGGTTGATT CTTTAAGAGA TTTAGCAGAA TCAACTATAG CATATATAAA TTCAGCAGTA GCTTTTGAAA AAGGTAACTA TGAGGAAGCT ATGAAATACT ATGTTCTAGG AGAAGAAGAG TACACTGCTT CAAGATCTCA TAGAACTCCT GTAATAAATG GACAATCTAG ACCAGAACCA GGTACAAGAC ACTTAATACC ATTTATTAAG GATTTATCTA AAATCATAGG AGATAATATT GACCAAGTTA TAAATCCAGA TACTACTAAG TTAACACTTC GTCCTTATAC AAATATGTCA CCTCTTTATT GGGGACATGT TCAAAATATA GCTGATGGAG ATAATACTAG ATATTCATGC ATGTGGATTC GTAATTCAGC TAAAGAAGGA GACTATGTTG CTGTAGAATT AAATGAGGTA ACTAAGGTTA ATAGCATTAC TTTTGAACAA GGACAAGATG AGGGAGATGC ATTTAACTAT GGTAAATTCC AATATTCTAT GGATGGTGAA AATTGGACTG ATGTAGATGG TGTAGATTAT GGACCAAAAA TGCATAAGAT TGTAGTTGAA GGTTTAGATA TAACAGCAAA ATATTTAAGA TTTATTCCTA CTAAAGAAAT TTTAAATAAC TGGATTGCTG TTAGAGAATT CTCTGTTAAT AAAAAAGATG AAAATAATAT GAAAGTTAAT GCATATACAA ATGTAGAAGC TTTAGCTAAG AATGAAGTAA GTATTTCAGA GGAAAAAGCT ACACTTTCAG ATTTAAATGA TGTTACTTTA TCAAAGGGAG AATATGTTGG AATTAAGTTA AATAAGCTTA GAGAAGTAAC TAACATAGTT TCAGATTTAA CAAATAAGGA TAATTTAACA TTAGAAACAT CAATTAATGG AGTTGAGTGG GTAGAAGCAA AAACTTTATC AGAAACTATA AATGCTCGCT ATGTTCGTAT TATAAATAAT ACAGATAAGG ATGTAACTTT TAATTTAAAT AAATTAGAAG CTGAATACTC TAATAATGAT GTGAATTTTG ATATTAGACC AACAGCAGAA GCAAAGTTTG AGCCTAAGAA CTTAATTGAT GGAAAATTAA ATACAGCATT TAAACCACTA GAAAGTGCAC CTAAATCTGG CCAATTAACT TATAGAATTT CTGACAAAAC AGATATTAAG AAGTTTACAA TAGTACAAAA TCCAAATACA ATTTCTAATG CAATTGTATC TGTAAGAAAT GAAAATGGAT GGAAAGAGAT AGGAAGTTTA GGAAAGAGCT TTAATGAGTT TAATACAGAA GATTTTGAAA ATGTCTTTGA AATAAAGGTA GAGTGGGATG GATTTGCACC TACTATTTAT GAAATAGGAC TTTCAACAAT TAAAGAAGAG GTTCAAGTAG ATAAGTCTAA ATTAGAAGAA GCTATTAAGG AAGTAGAAAA GCTTAAAGAG GAAGACTATA CAAAGGACTC TTGGAGTAAC TTAATAGAAA AGTTAAATTT AGCTAAAGAG GTATTATCTA AGGAAGATGC TACTCAAGAT GAGGTAGATA ATGCTATAAA AGCTTTAAAT GAAGCCCTTA ATGGATTAGT TAAAAAAGAA GAGACTGAAG GACCAGTAGA TCCAGACAAA CCAGAAGGCC CAATTGATCC AGACAAGCCA GTTGATCCTG AGAATCCAGA TAATACAGAG AAACCTGAAA ATCCTGAAGG TACAGATAAA CCAGAAACTC CAGACAAACC AGAGGGTAAT TTACCAAACA CTGGAGGAGC TTCATCATCA ATATTCTTAC AATTAGGAGT AGTAATGATG GCTTCAGGAG CTTTTGTATT AAAAAGAAAG AAAAGATAA
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Protein sequence | MGKKGNKLIE FVSKIMAFVM AVTLLSSLPV QNVLANGSKE TKGDEYEIYP IPQSIKYDNS IVTLGTDANV VFEEGIDEAT KNRLLEVLSI KGINHEESNE IKEDKTNFLI GINNSEGVVD KYFTDNNLVN DSHFENHDAH VVSVKGNVIA VLGKNTDSAF YGITSLKAIF NQLEGNELKE LLIEDYSDGQ WRGFIEGYYG IPWSNENRKD LMKFGGDFKM NSYIFAPKDD QYHSLKWREP YPAEKLAEIK EMVDVGIATK NKFIWTIHPF LKDGMNFGSE ESYKADLEKI IAKFEQLYSV GVRQFGVLAD DAEGEANNQV KLMEDLEKWR LQKGDVYEFI FVPKVYTKES AGGDVNNEYL KTIGTMPETI DIMWTGDVIL GYVTQETFEF FEEAVGRQAF MWLNWPVNDI NNKRLLMGKG EMLDPTVTNF KGIVTNPMQE AQASKVALFA IADYGWNRAD FDMDKSWKDS FKYIEPDASE ELYTFAKHMS DPAPNWHGLS LEESEELRPV IEEFTRRLWE KESVLDYSKV ILDEYQEILD ATNNFATKSK NELLKSEIKG WVDSLRDLAE STIAYINSAV AFEKGNYEEA MKYYVLGEEE YTASRSHRTP VINGQSRPEP GTRHLIPFIK DLSKIIGDNI DQVINPDTTK LTLRPYTNMS PLYWGHVQNI ADGDNTRYSC MWIRNSAKEG DYVAVELNEV TKVNSITFEQ GQDEGDAFNY GKFQYSMDGE NWTDVDGVDY GPKMHKIVVE GLDITAKYLR FIPTKEILNN WIAVREFSVN KKDENNMKVN AYTNVEALAK NEVSISEEKA TLSDLNDVTL SKGEYVGIKL NKLREVTNIV SDLTNKDNLT LETSINGVEW VEAKTLSETI NARYVRIINN TDKDVTFNLN KLEAEYSNND VNFDIRPTAE AKFEPKNLID GKLNTAFKPL ESAPKSGQLT YRISDKTDIK KFTIVQNPNT ISNAIVSVRN ENGWKEIGSL GKSFNEFNTE DFENVFEIKV EWDGFAPTIY EIGLSTIKEE VQVDKSKLEE AIKEVEKLKE EDYTKDSWSN LIEKLNLAKE VLSKEDATQD EVDNAIKALN EALNGLVKKE ETEGPVDPDK PEGPIDPDKP VDPENPDNTE KPENPEGTDK PETPDKPEGN LPNTGGASSS IFLQLGVVMM ASGAFVLKRK KR
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