| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1483 |
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| Symbol | |
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| ID | 4202266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1681600 |
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| End bp | 1682970 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638082361 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_695926 |
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| Protein GI | 261876166 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.820235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAATC AATATGAACT AAAGAATGAA AAAATTGGAA GGTTGCTTTT AAAATATTCA
CTACCAGCTA TACTATCTAT GATGGTAACT TCCTTATATA ACACTGTAGA TAGAGCTTTT
ATAGGTTCTA TTAAGGATAT AGGAGCCTTT GCCATATCTG GCTTAGGAGT AACTATGCCC
TTGTTTACAA TATTAGGTGC TTTCTGCGTT GCCATTTCTG TAGGAGGAAG CACTAATATA
TCAATAAAGC TAGGGGAAGA AAAGAAGGAA GAAGCTGAAA GAATATTAGG AAATACTTTT
ATATTATCCA TAGTTGTTGC TTTAATCATT ATGATCTTTG GATTCTCATT TTTAGAAAAA
ATACTATACT TTTTTGGTGC AAGTAAGGAA ACTATTATAT ATGCAAAGGA TTATATGAGG
GTAATACTTA TAGGGGCATG GTTTAACTTT CCTGGATTTG CTCTTAATAA TGCAATAAGA
GCTGAGGGAA ATCCAAAGTT AGCTGGTAAA ATCATGATAA TAAGTTGTGT TTTAAACATA
ATTTTAGATC CAATATTTAT ATTCTTATTT CATATGGGAA TTAAGGGAGC TGCCTTAGGA
ACTATAATTT GTCAATTCAT AGTTTTTCTT TGGACAATGT ATTATTTTAC CTTAGGAAAG
TCAAACTTAA AGCTAAGGAT TAAAGGAAAG ATATTAAATA AGAATATTTT AAGGGCAATA
ATTTTAATTG CTTTAACTCC ATTTTTTATG GAGCTTGCAG CAGGATTTAT ACATTTAATA
ACAAATAGAG TTCTTAAGGA TTATGGTGGA GATTTAGCCA TAGGAGCAAT GACTTCAATA
ACATCTATAT ACCTTTTATT TTTAATGCCA GTCTTTGGCT TAAGTCAAGG AATGCAAACC
ATAGTTGCAT ATAACTATGG AGCAAAGGAG TATAAACGTG CTAAAAAAAC TCTATTAATG
ACTATAATAA TTGCAACTTT AATTTTAACC TTAGGACTTG TACTTATTAG AATTTATCCA
AGAGAGTTTA TCAATATATT TACAAAGGAT AAGGAGCTAA TAAATATAGC ACTTAATGGA
TTAAAAATAT ATACTCTTGC CTTACCTACC TTAGGGGTTT CAATCTTAGG GGCAGTATAT
TTTCAGTCCA TAGGAAATGT TAAAAAGTCA ATTTTTCTAA GTTTATTAAG ACAAGTTATA
CTATTTATAC CTATTATATT TATAATACCT AGAGTATATG GACTAAATGG AGTGTGGATT
TCACAGCCCT TAGCTGATAT TTTAGCTACC GTATTAATAC TTATATTTTT AATAAAAGAA
TTTTACATAA GAGATACTCA TGATTTAATT TGCAGAGCAG AAAGAACATA G
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| Protein sequence | MKNQYELKNE KIGRLLLKYS LPAILSMMVT SLYNTVDRAF IGSIKDIGAF AISGLGVTMP
LFTILGAFCV AISVGGSTNI SIKLGEEKKE EAERILGNTF ILSIVVALII MIFGFSFLEK
ILYFFGASKE TIIYAKDYMR VILIGAWFNF PGFALNNAIR AEGNPKLAGK IMIISCVLNI
ILDPIFIFLF HMGIKGAALG TIICQFIVFL WTMYYFTLGK SNLKLRIKGK ILNKNILRAI
ILIALTPFFM ELAAGFIHLI TNRVLKDYGG DLAIGAMTSI TSIYLLFLMP VFGLSQGMQT
IVAYNYGAKE YKRAKKTLLM TIIIATLILT LGLVLIRIYP REFINIFTKD KELINIALNG
LKIYTLALPT LGVSILGAVY FQSIGNVKKS IFLSLLRQVI LFIPIIFIIP RVYGLNGVWI
SQPLADILAT VLILIFLIKE FYIRDTHDLI CRAERT
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