Gene CPF_1476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1476 
Symbol 
ID4202397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1673307 
End bp1675013 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content28% 
IMG OID638082354 
Productputative adenine deaminase 
Protein accessionYP_695919 
Protein GI110799205 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1001] Adenine deaminase 
TIGRFAM ID[TIGR01178] adenine deaminase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0153306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTAG AATTAATTAT TAAAAATTTA AACGTATATA ATAGTTATTT TAAAAAATTC 
ATAAAAGGTG ATATCTTAAT AAATAAGGGG AAATTTCTTC ATATAGGGAA AGGATATGAA
GATAGATTAT GGTCTGAAAA TGTAATAGAT GGGGAAGGAA AATATATAAT TCCTGGATTA
ATAGATATAC ACATGCATAT AGAGAGTTCT ATGACTATTC CAAGGGAATT TTCTAAGGCT
GCAATAAAAC ATGGGGTCAC TACAGTAGTA GCTGATCCTC ATGAAATTGC TAATGTTTTT
GGAATAAGAG GTATAGAAGA ATTTATTAAA TTTAAGGGAA ATCTAGATAT ATTTTATGGT
ATCCCTAGCT CAGTACCTTC AACTTCAAGT TCACTAGAGA CAACAGGGGA GAAAATAACT
CACAATGAGG TAAAAAGATT ATTAGAGTAT GATAATATTA TTTGTCTTGG AGAAGTAATG
AACTTTAAAG ACTTAATAGA AGATGATGAT TCTAATATAA ATAAAATAAT AAATATAAGT
AAAGAAAAAA ATATACCTTT AGAAGGGCAT TGTCCTAAAA TACAAGGAGT AGATTTATCA
CTTTATATTT ATAGAGGGGT TAATGGGGAT CATACTCAGC AGTCAGTTGG ATCCCTTCAA
GAAAAAATTC AAAATGGTAT GTTTATAGAG ATGCAACATA AATCAATGAC ATTAGAGAAT
ATAAAATTTT TGATTGAAAA TAATTTATAT GAGCATTTTG CATTAGTAAC AGATGATGTA
ATGGCAGATA AATTAGTTAA GGGGCATCTT GATGAGATTT TAAAGGAAGC CGTAAAGCTT
GGAATGTCTA TAGAGAATGC AATATATGCA TCTACATATA CACCAGCTAG AAGAATGAAT
CTTTTAGATA GAGGAACAAT TGCACCTGGA AAGCTAGCAG ATTTTATATT GTTAGATAGT
ATAGAAGATT TTAATATATA TGAAGTTTAT AAAAATGGGG AAATGGTTTT TAATAGAGAT
AAGGGGTTAA AAGAAGAGTT TTTTGAAGAT AAAAGCAAAT TAGATTATAG ATTTTATAAT
AGTATAGAAT TAAATAATAT TACTAAAGAA AGTTTAGAGG TTAAAGTACC AAATAAGTAT
AAAAATAAAG TAAATTGTAG AACTATGAAA GTCTTAAAGA ATACTACTTT TACAGAAGAG
GGAGAAGTAA CTTTAAATGT TTATAATAAT ATTTTACAAT GGGAAAAGAG TAGCTGTGCA
TTAATTGCTG TTTTTGAGAG ATATGGTAAA AATAATAATA TATCTTTTGG ATTAGTAGAA
GGAGAAATTA TAAAAGAGGG AGCAATAGCA ACTACTTGGG CTCATGATCA TCATAACCTT
ATGGTAATGG GAAGAAATAT TAGTGATATG ACTATAGCGG CTAATGAGGT TATAAATTCT
AGGGGAGGAT ATGTAGTCTC AAAAAATAAT GAAGTAATTG CTAAATTAGA GTTACCAATA
GGTGGAATAA TCAGTGATGA ACCTATTGAA ATCATAGGAG AAAAGCTAGG GGAAGTTAGG
AGTGCCATGA GAGATTTAGG ATATAATCAT ATGAATGAAA TTATGTCATT TAGCACTTTA
TCTTTACCTG TTAGTCCTGC ATTAAAGATA ACAGATAAAG GGTTAATAGA TGTTAAAAAA
GGTAGTATTG TTTCTTTATT CAAATAA
 
Protein sequence
MQVELIIKNL NVYNSYFKKF IKGDILINKG KFLHIGKGYE DRLWSENVID GEGKYIIPGL 
IDIHMHIESS MTIPREFSKA AIKHGVTTVV ADPHEIANVF GIRGIEEFIK FKGNLDIFYG
IPSSVPSTSS SLETTGEKIT HNEVKRLLEY DNIICLGEVM NFKDLIEDDD SNINKIINIS
KEKNIPLEGH CPKIQGVDLS LYIYRGVNGD HTQQSVGSLQ EKIQNGMFIE MQHKSMTLEN
IKFLIENNLY EHFALVTDDV MADKLVKGHL DEILKEAVKL GMSIENAIYA STYTPARRMN
LLDRGTIAPG KLADFILLDS IEDFNIYEVY KNGEMVFNRD KGLKEEFFED KSKLDYRFYN
SIELNNITKE SLEVKVPNKY KNKVNCRTMK VLKNTTFTEE GEVTLNVYNN ILQWEKSSCA
LIAVFERYGK NNNISFGLVE GEIIKEGAIA TTWAHDHHNL MVMGRNISDM TIAANEVINS
RGGYVVSKNN EVIAKLELPI GGIISDEPIE IIGEKLGEVR SAMRDLGYNH MNEIMSFSTL
SLPVSPALKI TDKGLIDVKK GSIVSLFK