| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1474 |
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| Symbol | lacZ |
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| ID | 4201238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1667508 |
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| End bp | 1671575 |
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| Gene Length | 4068 bp |
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| Protein Length | 1355 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638082352 |
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| Product | beta-galactosidase |
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| Protein accession | YP_695917 |
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| Protein GI | 110798593 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCAT TTAACAAAAG GGGGACAGCT TTAGGAGCAG CAATTGCATT TGCTTTAACC
TTAGCACCTA CCTTAGTAAT GGCTGAAACA AGACAAATTC CTGAATCTGA AACAGTAAAT
GTTGGATTCA TAAAAGATGG AGAGAGATCA ACAATATTCA ATCAAAACTG GAAGTTTTTT
AAGGGAGATC CTTCTGGTGC TGAAGGGGTA GACTTTGATG ATTCTTCATG GAGAGGACTA
AACTTACCTC ATGATTGGAG TATTGAAGGA GATTTTACTG TTGAAGGGGA AGCTGAAAGT
GGATTCTTAT TAGGAGGAAC TGGATGGTAT CGTAAAGCCT TTGTAGTTCC TGAAAAGTAT
AATGGTAAGG ATTTTACATT AAACTTTGAT GGCGTATATA TGAATGCTGA AGTATATGTA
AATGGTAAAA AGGTTGGTGA GCATAATTAT GGATACACTT CTTTTGCCTT TGATATTACT
GAAGCTTTAA TATGTGATGG ACAAACTGAA AATATAATTG CTGTTAAGGT ATCTAACCCA
GTGCCAACTA GTAGATGGTA TTCTGGAAGT GGAATTTATC GTGATGTAAC TTTAAGTGTA
ACAGATTCTA TTCATGTTGC CCATGCAGGA ACAACAGTTA CTACTCCAAA ACTTGAAGAG
CAAAAAGATG GAGACGTAGA TGTAGCTATT GAGACTATAG TTGAAAACGA GTCCAAAGAC
AATTCTATGG TTACTGTAAA AAGTACAGTA GTAAATTCTA AGGGAGAAGA AGTTAGTGAG
TCAGTAATAA ATGAAAAAAG TATAGGAGCT AATGAAAGTT ATACTTTCAA TCAAACTGCT
ATTGTAAATA ATCCAGGTTT ATGGTCAGTT GATAATCCAA ATATGTATAA GGTAAAAAGT
GAAGTATTAG TAGATGGAAA TGTTATAGAT ACTTATTTTA CTGATTTTGG TTTTAGATAT
TATAATTTTG ACAAAGATAC TGGATTCTCT TTAAATGGAG AAAATATAAA GTTAAAAGGT
GTTTGTATGC ACCATGACCA AGGAGCTTTA GGAGCAGCAT CTTATTATCG TGCAGTAGAG
CGTCAAATGG AGAAAATGAA GGAAATGGGA GTAAATGCAA TCCGTGTTTC TCATAATCCT
GCTAGTGAAA TGTTATTAGA AATTTGTAAT CGTTTAGGAT TGTTGGTTAT TAATGAGGCC
TTTGACACAT GGACAAATCC AAAGAACGGA AATGTAAATG ACTTTTCTAA GTATTTTAAT
GAAGTAATAG GAGAAGATAA TGAAATTTTA AATGGTTCTC CAGAAATGAC ATGGGGAGAG
TTTGAAGCTA GATCTATGGT TAAAAACTCT AAGAATAACC CATCTATAAT AATGTGGTCA
ATAGGTAATG AGGTATTAGA AGGAATTAGT GGAAGTGCAT CTAATTATAC TAACGTAGCT
CAAAATATAA TTGATTGGAT TAAGGATGAG GATGAAACAA GACATGTTAC TATAGGAGAT
AATAGAACTA AAAATGGAGA TAGAACAGCA GAGGCTATTT CAGAGGTGGT TGATGACAAT
GATGGATTAG TTGGTTTTAA CTATGCAAAT GAAGCACAGG TTGCACAGCA AAGAGCAAAC
CATCCAGATT GGACATTATA TGCTTCTGAA ACTAGTAGTG CAATACACAC TAGAGGATAT
TATAAAACAA AGGGAATAGA TTATAGTAAT CATCGTATTT CAGAGTATGA TAATAATCAA
ACAAGAGTTG GTTGGGGACA TTCAGCTAGT GATGCTTGGA AGTTTGTAAT CAAAAATGAT
TATAATGCTG GAGAATTTGT TTGGACAGGA TTTGACTATA TAGGAGAGCC TACTCCTTGG
AATGGTACTG GTACAGGTAC AGTTGGTGGA GGTAATGGAG CAGCTCCAAA ATCAAGTTAC
TTTGGTATAG TTGATACTGC AGGATTTGAA AAAGATATTT ATTATTTATA TCAAAGTCAA
TGGAATGATG ATGTAAATAC ATTACATGTA CTTCCAACGT GGAACAGAGA AGATATAGTT
ATAGAAAATG GAAATGTTGA AGTAAACGTA TTTACTGATG CTCACAAAGT TGAATTATAT
CTAAATGATG AAAAGATTGG GGAGCAAACT TCAACTGAGC ATACAACTGA TGCAGGATAT
AAATACTATA CTTTTGGAAA TGATTCATTG TATCCAGTAT TTAATGTTCC TTATAAAGAG
GGTACATTAA CTGCTAGGGC ATATGACAAA GAAGGAAATG AAATCACAAA TACAGAGGGA
AGAAATACAG TGAAAACAAC TGGAGAGGCT TCTACTGTAA GATTAAGTGC AGATAGAGAT
ACTATTGATT CAGATGGATA TGATTTATCT TATATTACTG TAGATATTGT TGATGAAAAT
GGCAATATAG TTCAAAATGC AGATAACAGA TTAAATTTTG AGTTAGAAGG AAATGGAAAA
ATTGTAGGTG TTGACAATGG AGATCAAACT GATACAGATT CTTATAAACC TACAAGTGAT
ACAGAAGCTT CTAGAAAAGC ATTAAGTGGT AAGGCATTAG TAATAGTTCA ATCAACTAAG
GATGCTGGAA ATATAAGATT AAATGTTTCA GGTGAGGGAT TACAATCTCA ATCTATAGAA
ATTAATACTG TAAATAATGC TGGAGAAGAT AAGTTCTTAG AATCTTATGA AATAGTTAAA
GACTACTATG TTAATTTAAA TGAAAAGCCA GAGTTACCAA GTACAGTAGA AGGAAGATAC
AGTGATGGAA CAACTGAGAC TTTTAATATT TCATGGAATG ATTATGATGA ATCACAATTA
AATACTCCTC AAGTATTTAA GATAAATGGT AAATTAGAAG GAACAGATGT GGCTGTAAAT
GTAAATGTCC ATGTAATTGG TGATGTGGTT TCAATGGAAA ATTACTCAAC ATTTACTTAT
GCTGGACAAA CTCCAACACT TCCTAAGACT GTTAAAGGAT ATTTAGCTGA TGGAAATGAA
AGTGAAGAGT TTAAAGTGGA TTGGAATTTA GAAGGCGTAG ATTTCTCTGA GCCTAATACA
ACAGTTGAAG TTTTAGGAGA AGTATCCTTA TTAGGTAAGA CATATACTGT TACTTCAACA
GTGCGTGTAG TTGAAGCTTT AAAAGCTGCT GCTAACTTAG CTATAAATAA GGATACTAAT
AAAGATGTTC CTGCTTTAAG TCAAAGTTGC GTTTCTCAAG CTGATAATTT AAATTCTATT
AATAATGGAA TAACTAATAA TGGTACAGAT ACAAGAGAAC GTTGGACAAA CTGGAATGAA
AGAGATTTAA CTGTAAATGG TGAACCTAAA GGGGCATATG TTCAATTAGA TTGGGAAAAT
AAATATAATA TTGATAGATT AGATTTATGG TTATTTACTG ATAATATTTA TGGAAGAATT
CCTAAGAAAG TAGAAATAAG TTATAAAAAT GAGGCTGGTG AATATGAGGT AGTTACTCAT
TCAAATACAA CAGAGGTATC ATACCTTGCT GGAGAAACAA CTTATTTCTT AGATAAAGTA
ATAAATACTG ATAGTATTCG TGTTTATATG CAACAACCTG AAGTAGGTAA GTGTATTGGA
TTATCAGAGG TTGCAGTATA TGAGTATGTA CCACAAGTAA GTGCTAATGA AGGTAATAAA
TTATCTGAAA TAAAATTAGA TGGCGAAGCC TTAGAAGGAT TTAATCCTGA TACTAATGAA
TATACAGTTA ATTTAAAAGA ATTACCTAAA ACTGTAGAAG CTTCAGGGGA AGAAAATGTG
GCTATAACTA TATTACCAGT TCATAATAAT AAATCAATAA TCATTGCTCG TTCAGAATCT
GGTGCTAAAA ACATCTATAC TGTAAATTAT GTATTAGAAG AATCTGAAGG GTCAGCAGAT
ATTAATGAGG ATGGTTCTAT AAATGTAGGA GATTTATCCA TAGTATCTAA ATATCAAGGA
GAGATTATAT CAGGAAATGC TTTAAGTGAA AAATCTGATA TAAACAAAGA TGGAGTAGTA
GATAAAGCTG ATATCCAAAT AGTTATGGGT AAGATCTTAG GAGAATAA
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| Protein sequence | MQSFNKRGTA LGAAIAFALT LAPTLVMAET RQIPESETVN VGFIKDGERS TIFNQNWKFF
KGDPSGAEGV DFDDSSWRGL NLPHDWSIEG DFTVEGEAES GFLLGGTGWY RKAFVVPEKY
NGKDFTLNFD GVYMNAEVYV NGKKVGEHNY GYTSFAFDIT EALICDGQTE NIIAVKVSNP
VPTSRWYSGS GIYRDVTLSV TDSIHVAHAG TTVTTPKLEE QKDGDVDVAI ETIVENESKD
NSMVTVKSTV VNSKGEEVSE SVINEKSIGA NESYTFNQTA IVNNPGLWSV DNPNMYKVKS
EVLVDGNVID TYFTDFGFRY YNFDKDTGFS LNGENIKLKG VCMHHDQGAL GAASYYRAVE
RQMEKMKEMG VNAIRVSHNP ASEMLLEICN RLGLLVINEA FDTWTNPKNG NVNDFSKYFN
EVIGEDNEIL NGSPEMTWGE FEARSMVKNS KNNPSIIMWS IGNEVLEGIS GSASNYTNVA
QNIIDWIKDE DETRHVTIGD NRTKNGDRTA EAISEVVDDN DGLVGFNYAN EAQVAQQRAN
HPDWTLYASE TSSAIHTRGY YKTKGIDYSN HRISEYDNNQ TRVGWGHSAS DAWKFVIKND
YNAGEFVWTG FDYIGEPTPW NGTGTGTVGG GNGAAPKSSY FGIVDTAGFE KDIYYLYQSQ
WNDDVNTLHV LPTWNREDIV IENGNVEVNV FTDAHKVELY LNDEKIGEQT STEHTTDAGY
KYYTFGNDSL YPVFNVPYKE GTLTARAYDK EGNEITNTEG RNTVKTTGEA STVRLSADRD
TIDSDGYDLS YITVDIVDEN GNIVQNADNR LNFELEGNGK IVGVDNGDQT DTDSYKPTSD
TEASRKALSG KALVIVQSTK DAGNIRLNVS GEGLQSQSIE INTVNNAGED KFLESYEIVK
DYYVNLNEKP ELPSTVEGRY SDGTTETFNI SWNDYDESQL NTPQVFKING KLEGTDVAVN
VNVHVIGDVV SMENYSTFTY AGQTPTLPKT VKGYLADGNE SEEFKVDWNL EGVDFSEPNT
TVEVLGEVSL LGKTYTVTST VRVVEALKAA ANLAINKDTN KDVPALSQSC VSQADNLNSI
NNGITNNGTD TRERWTNWNE RDLTVNGEPK GAYVQLDWEN KYNIDRLDLW LFTDNIYGRI
PKKVEISYKN EAGEYEVVTH SNTTEVSYLA GETTYFLDKV INTDSIRVYM QQPEVGKCIG
LSEVAVYEYV PQVSANEGNK LSEIKLDGEA LEGFNPDTNE YTVNLKELPK TVEASGEENV
AITILPVHNN KSIIIARSES GAKNIYTVNY VLEESEGSAD INEDGSINVG DLSIVSKYQG
EIISGNALSE KSDINKDGVV DKADIQIVMG KILGE
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