Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1472 |
Symbol | |
ID | 4203492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1660597 |
End bp | 1665363 |
Gene Length | 4767 bp |
Protein Length | 1588 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638082350 |
Product | putative alpha-N-acetylgalactosaminidase |
Protein accession | YP_695915 |
Protein GI | 110799557 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAAGTTA ATAAACTTTC AAAAAAATCA TTATCTTTAA CATTAGGGCT CAGTGTGGCT CTAACTAACA CAGCACCATT ATCAGTATTA GCAAATGGAT CCAAGGTAGA GGATGTTGTA GCTAGTAAGA GCCAAGATAA AATCACTATT GGAAACGAGT ACATTTCTAG AGAGTTTTCT ATTGAAAACG GGAAGGTATT AACAAGTGAA ATAGAAAATA GCAGAGCAAA TACTACTTTA GTTCCACAAT TAGGTTCAGA AGATTTTATT ATAAATACAA TACAAGAAAA TTCTGATTTA CCAGAAGTAG AAGCTAATTC TCCAAAGGAA GTTTTAGATA GAGCTAACTG GAATGCAACC CTTACAGCTA ATAGTGGAAC AGCATATCCA GCTACAGATA TTGAAAAATT ATTCGATGGA GATAAAAATA CTTATATAGA TAGTTATAAT ATAACTGGTT ATCCAACATC ATTAAAAATC GATTTAGGAG AAGTTAAAAC AGTATCTTCA TTTTCTTACC AAAAAAGACC TGGATTTACT GATGCTAATT ATGGCAAAAA TGGAACTATG GGACAGTACA AGCTTTATGT AAGTGAAGAT GGAGAAAATT GGACAGAAGC TGGAGAGGGT GAGTTTACTA GAGAAGACTT TAACTTGCAT CAAGAAGGTA ATCTTCACAA TGTAGGAGAT GTTGTTTATG GTAATTTTGA TAAAACTTAT GAAAGTAGAT ATATAAGAAT AGATCAATTA TCAGATGCCT TAGGCAATAC ACAGGAGTTT TCAGGAGCAG AAATAAATTT ATATTCAGAT AAATATGAAA AACCAGAGGA ACCAATAGCA CCTAAAACTG CCATTAAATC AAGTGATTTA ACAATAGATA CTTCCTCTAC AAAGATAGAA GATATTGAAA ATGGGAAAAA GCTTACTATT TCATATGAGC CATATGATTT TAATGGAACT GAGTATGATA TAGATATGGT TACTGTTCTT GAAAATGATG ACCACTATAT GAGATCTTTC CTTGAAATCA AAACTAATAA TGAAAATGCA AAGATAGATT ATATTGATTT AGATCACTTT ATATTAGAAG ATGGCATAAA GGATACTTTA TGGTCCCATC CAGATTTAGA AGATGTAACT TCCATATTAA TAGGAAAAAA TGAATTGATG CTAGGGCAGC CTATTTATGC CAATGGTATG TTCTTTGGAT CAGAATTCCC AGCTACAGAT ACTGATGTAG TGAATGATGG AATGCAAATT AGATATTATA GTGGTAAAAG TTTTGAAGAG TTAGAAAGGG ATAATCAATT AACTACAGAT GGAAAGTTTG TATCATGGCA AAATGTTGTG GGAGCTGCTA AGGGAGTAGA TACAGATGTT GTTCAAACTG ATTTCTTTGA ATATATATCA GAAATAGCTA CACCAACTGA TTTTAGAAAG CAATATAATT CATGGTATGA TAATATGCTT ACAATAACTG ATGAAAGTAT TTCTAAATCT TTCTATGGAA CAGAAAAAGG ATTAACAGAA AATGGAGTGG AACCAATTGA TTCTTATGTA GTAGACGATG GATGGCATAA CTATAGAGAT CCAGAATTTA ACCCTAATAT TTCAAAAGAA CAAGCTGGAA ATAGTATGAA TAGAACTGGA TTTTGGGAGT TTAATGATAA GTTTCCTAAT GAGTTATATA CATCTACAGA GTTAACAAGT AAATTTCAAT CAAAATTTGG ATTATGGCTT GGACCACAAG GAGGATATAA TTTCTATGGT GGTTTTGCAA GATACTTAGA AAAAATGGGA ACTGGATATG CTCAAACTAA TAATGGGGTA AATGTTTGCG TTGGTTCAGA TAGGTATATT AAGAATTTAA CAAGTCTTTT CTTGGATTAC CAAGAGAGAT TTGATATAGA TTATTGGAAA CTAGATGGAT TTGCTCTTAG ACCTTGTACA AGTGAAAATC ATGATCACAT GACTGGTGGA CACAACAATA TGTATTATAC AACAGACCTA TGGGAAAAGT GGACAGATGC TTGGGAAACA ATGAGAGCTA GTAGAGCAGA AGAAGGAAAG GACCTATTTA TAAATGCAAC TTGTTATGTA AACTTAAGTC CATGGATTCT TCAATGGGTA AATACTGTAT GGATACAAAA TTCACAAGAT ACAGGAGAAG CTGGTACAGG TTCAAGACAT CAACAAAAAA TAACTTATAG AGATGCTGTT TATCATGATA TTTATAAATC AAACCAAATA CAATTCCCTG CAAAGAATAT ATATAACCAT GAGCCAATAT ATGGTGTATC TGATGGAAGT TTTGCAACTA CAGAGGACTT TAGAGATTTC TTATTTGCTA ATGCAGTTCG TGGAACAGCA TTCTGGGAAT TATATTACTC ACCATCAATA ATGGATGATG AAAAGTGGAA AGTTAATGCA GATGTTTTAG ACTTTGTGGA AAATAATTTT AATGTTTTAG AAAAGGCTAA GTTATTCGGA CATAGAGCTA CAGAGGGTGT TTATGGATAT TCTGCATGGG ATGGCAATGA AGGTATAGTT TCATTTAGAA ATCCAACGGG AGAGACTAAA GAGTATACTT TAGAGTTAAT TGATATAGTA GGAGTTCCAA AGTCAGTATC AAATCTTAAA GGAAATCAAG TATTACCATA TAAAGTTGGT GATATAGGAT CAGTATCTTA TGGAGATAGT ATAACTGTAA CTTTAGAGCC ATATGAAACT AGAATACTTC AATATGGAAA GGTAGATAAT AAAGCTTCTG AAATAGTTTC TGCTAAGGTA ACTGGAGAAA ATGAAATAAC TATTAAGTAC AATGAGCGTG TTGAAAATGG AGAAGGAGTT TATTCAGTTG AAGGAAATGA AATTATTGAA TCTAAATTAT TAGATGATTA TAGAACAGTG GTTATAAGTA CTTCTAATAA ACTTCAAGGA GAGGCTAAAT TAAATATTAA TGGAGAAAGA GATGCTCTTC AAAATCCACT TACAACAAGT TTAACAATTC CTGTTTATAA TAATGGAAAA ATTGTTTCAG TACAAAGTGG AGAGGAATTA ATAGGTGGAG AAAATATAAA TAAGAAGTAT AATGGAAATT CAGACACATA CTTCTTAGAA ATGAATAAAG CTTATGAGGT TGATACAAAT GAAAGCTTTA AAGGAAAAAC TGATTTTGCA ATATCTATGG CTATTAATAC TACATCATCT AATGTAAACT TATTAAGCCA AGGAGAGGAA ATAAAGCTAT CAATTGATGA AGAAGGATAT GTAAACTTCA AAGTTAAAGA TTTAAATCTT ACTTCAAAGT CAGAAGTAAC TACTGTTACA GAAAAGGCTC ATGGAACTTT TGGAACTAAT GAATATGTAG AAACTTCAAC TGAATCAACT TTTGTTGGTA AAGTAAATGA TGGAAAATTA CATCATATAT CTGCAGTTAG AGAGGTTAAC GGAGTTCTTA AAGTTTATAT TGATGGTGAA TTAATGAATT CTGTATATGA TAAGTCATTA ATAAATCAAG AGATAAATGG TGGAACAATT ATGGTTTCTG ATAATAACTT TACTGGAGTT ATAGGAGATA TTGAATTAAG AAATAGTTCA ATATACTATG ATGAAGCAAA AGAACTTTAT AATTCTTATG AAGGTTCTGA CATAATTGAG TATAGCAGAG AAAATTGGGC TACAAGTGCT TGTTCAGAAA TGAACCCACC AAGTGGCAAT GATGGTCCTG CTTCATATGC TATTGATGGA AATGAATCTA CTTTATGGCA TACAAATTAT GTTGGTGGAG ATAATCATAG TGGAAATCAT TGGCTTTCTG TAGATTTTGG TGAAGAATTA GACTTTGATA CAGTTAATGT ATTATCTCGT GGAAAAGAAA TAAATGGTTC AATTAAAGGA TATAAGTTAG AGGCTAATAT AAATGGAGAA TGGGCATTTG TTAAAGAAGG AGAATTCACA GATGGAGTTA AGGAAAAAAT AGAGTTAGAT GAAGCTATAA AAGCAAGTGG AATTAAATTA ACAGCCCTTT CTACATTTAA TGGACAAAAC TTTGCAGCTG TAAGAGAAAT AAGTGTTACT AAGAAGGATA GGGAAGCAAC AGAGGATGAA ATAAATGAAT TAAAAGCTTT AGTTAAGGAA ATAAATAAAG AGGATTATAC TAAGGCAACA GCTAATAGAT ATATTAAGGT AGCAGAAAAA GTAAATGCAT TAGATAAGAT TAATTTATCA CAATTAGATA GATTAAGAAG TGATTTAAAT AAAGCTTATG AAGGATTAGT AGAAGCTAGA GAATTAAATA AAACTTTAGT AGAAGCTGGT AAATTAATTA AAGAAGATTA TACAATTGAA AGCTGGACAG TATTTGAAGA GGCATTAAAT CATGCAAAAG ACTTAAACAA TGATATAGAA GCTACTAAGG AAGGGGTAGA TGAAGCTACA TCAAGATTAA AAGAAGCTAT GAATTCTCTT GAGAAGGTTA ATAATGAAGG AGAAATAGTT AATGGACCTG TGAATAATTT TGAGGCTTCA GAAATAGCTA AGAAGAACGT AACTGTTACT TGGAGTGCTC CAGAATCTAC AAAGGGCTTA GAAGGATATG CTCTTTATAA AGATGGCAAA AAGGTAGCTG AAATAGGTGC AGAAGAAACA TCATATAAAT TTAAAGGATT AAACAGACAT ACAATCTATA ATTTCAAGAT TGCTGCTAAA TATTCTAATG GAGAACTTTC AAAGAAGGAA AGTATAACTT TAAGAACTGC TAGATAA
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Protein sequence | MQVNKLSKKS LSLTLGLSVA LTNTAPLSVL ANGSKVEDVV ASKSQDKITI GNEYISREFS IENGKVLTSE IENSRANTTL VPQLGSEDFI INTIQENSDL PEVEANSPKE VLDRANWNAT LTANSGTAYP ATDIEKLFDG DKNTYIDSYN ITGYPTSLKI DLGEVKTVSS FSYQKRPGFT DANYGKNGTM GQYKLYVSED GENWTEAGEG EFTREDFNLH QEGNLHNVGD VVYGNFDKTY ESRYIRIDQL SDALGNTQEF SGAEINLYSD KYEKPEEPIA PKTAIKSSDL TIDTSSTKIE DIENGKKLTI SYEPYDFNGT EYDIDMVTVL ENDDHYMRSF LEIKTNNENA KIDYIDLDHF ILEDGIKDTL WSHPDLEDVT SILIGKNELM LGQPIYANGM FFGSEFPATD TDVVNDGMQI RYYSGKSFEE LERDNQLTTD GKFVSWQNVV GAAKGVDTDV VQTDFFEYIS EIATPTDFRK QYNSWYDNML TITDESISKS FYGTEKGLTE NGVEPIDSYV VDDGWHNYRD PEFNPNISKE QAGNSMNRTG FWEFNDKFPN ELYTSTELTS KFQSKFGLWL GPQGGYNFYG GFARYLEKMG TGYAQTNNGV NVCVGSDRYI KNLTSLFLDY QERFDIDYWK LDGFALRPCT SENHDHMTGG HNNMYYTTDL WEKWTDAWET MRASRAEEGK DLFINATCYV NLSPWILQWV NTVWIQNSQD TGEAGTGSRH QQKITYRDAV YHDIYKSNQI QFPAKNIYNH EPIYGVSDGS FATTEDFRDF LFANAVRGTA FWELYYSPSI MDDEKWKVNA DVLDFVENNF NVLEKAKLFG HRATEGVYGY SAWDGNEGIV SFRNPTGETK EYTLELIDIV GVPKSVSNLK GNQVLPYKVG DIGSVSYGDS ITVTLEPYET RILQYGKVDN KASEIVSAKV TGENEITIKY NERVENGEGV YSVEGNEIIE SKLLDDYRTV VISTSNKLQG EAKLNINGER DALQNPLTTS LTIPVYNNGK IVSVQSGEEL IGGENINKKY NGNSDTYFLE MNKAYEVDTN ESFKGKTDFA ISMAINTTSS NVNLLSQGEE IKLSIDEEGY VNFKVKDLNL TSKSEVTTVT EKAHGTFGTN EYVETSTEST FVGKVNDGKL HHISAVREVN GVLKVYIDGE LMNSVYDKSL INQEINGGTI MVSDNNFTGV IGDIELRNSS IYYDEAKELY NSYEGSDIIE YSRENWATSA CSEMNPPSGN DGPASYAIDG NESTLWHTNY VGGDNHSGNH WLSVDFGEEL DFDTVNVLSR GKEINGSIKG YKLEANINGE WAFVKEGEFT DGVKEKIELD EAIKASGIKL TALSTFNGQN FAAVREISVT KKDREATEDE INELKALVKE INKEDYTKAT ANRYIKVAEK VNALDKINLS QLDRLRSDLN KAYEGLVEAR ELNKTLVEAG KLIKEDYTIE SWTVFEEALN HAKDLNNDIE ATKEGVDEAT SRLKEAMNSL EKVNNEGEIV NGPVNNFEAS EIAKKNVTVT WSAPESTKGL EGYALYKDGK KVAEIGAEET SYKFKGLNRH TIYNFKIAAK YSNGELSKKE SITLRTAR
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