| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1468 |
|---|
| Symbol | |
|---|
| ID | 4203514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 1656030 |
|---|
| End bp | 1656944 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 638082346 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_695911 |
|---|
| Protein GI | 110799771 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3440] Predicted restriction endonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.978213 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATAGAA TTAAATCATG GGAATATGAT GATGTTTATA ATAAATTTGC CATAAAGGAT
TTAGATAAAT CCTCATTTAA GAGGGGAAGC CATATACCAA TAAAGGTTAG AAAGGTCTTT
GAATGTGAAG ATATTAAATA TGGAGATAAG AAGAAAATAA CTCTTATATA TAAAGGGGAA
GCCTTTGAAG CTGAAATAGA AGGCGGAATC AAAGGTAGAA TACGAATGAA TTGGCCAAAG
TTAATACCTA AAATGAAGGA AGTTTTTAAA AATGAAATAA ATGACTTTGA AGATTCTAAA
GAGCTTAGTG TAAGAGTGCC TAGATTGAAA TTTACAAAGG AAACAGCCAT AAAATATGAT
GTGGAAATGA AAACTAAATA TAGTCATGAT GTTCTTTTTG AGTTAGAAAG GCTAGATATA
GATGTTGAAA ATAAAACCAT AGAAGAAATA AATGAAGTGG GAGAAGTTAT AGAGAGGATT
GTTAAGGCTA GAAAAAATCA AAACAAATTT AGAGAAGCAC TATTTAAAAG AGAGAGTAAG
TGTAAAATTT GTGGACTAGC TCATAAGGAG CTTTTAATAG CAAGCCATAT AAAACCTTGG
AGTAAAAGTA CACCAGAGGA AAAGCTAAAT CCCTTTAATG GATTCTTACT ATGCCCAAAT
CATGATTCCT TATTTGATAA GCATTTAATA AGCTTTCAGG ATAATGGAGA AATCATAATA
TCTAAAAGGC TCTCAGAAAA GGAGCAGGAG CTACTAAACA TAAATAAGGA TATCGTGGTT
AATATTGAAG ATGGAAACAA GAAGTTTTTA AAGGAGCATA GAAAGGTTTT TTATGATATA
GAGGAGGCCT ATACTGTAGA GAAAGAATTA GCAATAAGCA ATAAGGAAAT ATATAAGGTT
GAATTAGAAG TTTAA
|
|---|
| Protein sequence | MDRIKSWEYD DVYNKFAIKD LDKSSFKRGS HIPIKVRKVF ECEDIKYGDK KKITLIYKGE
AFEAEIEGGI KGRIRMNWPK LIPKMKEVFK NEINDFEDSK ELSVRVPRLK FTKETAIKYD
VEMKTKYSHD VLFELERLDI DVENKTIEEI NEVGEVIERI VKARKNQNKF REALFKRESK
CKICGLAHKE LLIASHIKPW SKSTPEEKLN PFNGFLLCPN HDSLFDKHLI SFQDNGEIII
SKRLSEKEQE LLNINKDIVV NIEDGNKKFL KEHRKVFYDI EEAYTVEKEL AISNKEIYKV
ELEV
|
|---|
| |