Gene CPF_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1458 
Symbol 
ID4202829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1642704 
End bp1643195 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content26% 
IMG OID638082336 
Producthypothetical protein 
Protein accessionYP_695901 
Protein GI110799148 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000609235 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGGAAAA AGGTAATATT CCCTATAGTG ATTATAATAA TTATTCTTGG AGTTCTTGTT 
TCTATTTTTA TTAAAGAAGA TAATTCCTTT AAGGTGAAGG AAAGTGAAGT AGTGGCAATG
AAATACTATA TGAATAAAGA AAGAAATGAA AATTACCATA ATGTACCTAA GGATTTAGAG
AAGAAGAGTA TTGAAGAGGT AGTAAGTGTT TTAAATGAAA GTGATGTTAC GGAAAAAAAG
AACTTTGCAC CAATAACTGA TAGTGATAGG AAATTATATA TATTTTTAAA AAACAATGAT
GTAATAGTTA TAAATAATAA TAGTATAGAT GAGGAAAAAT ACATAGTTGA ATATCCTAAT
GACTCAATTT TAGGTAGCAG TAATAAATCA AAATATATGG TAATAAACTC AGAAAGGTTA
AAAAATGTCT TTTTAAATAT AGAAAATTCT TTTAATGATG TAAACGATTA TAGGCAGAGA
ATGAGAGTAT AG
 
Protein sequence
MGKKVIFPIV IIIIILGVLV SIFIKEDNSF KVKESEVVAM KYYMNKERNE NYHNVPKDLE 
KKSIEEVVSV LNESDVTEKK NFAPITDSDR KLYIFLKNND VIVINNNSID EEKYIVEYPN
DSILGSSNKS KYMVINSERL KNVFLNIENS FNDVNDYRQR MRV