Gene CPF_1454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1454 
Symbol 
ID4202126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp1636747 
End bp1637217 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content28% 
IMG OID638082332 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_695897 
Protein GI110800943 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0480002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATAGTA ATGCTTTAAA AAAATATAAA TCTTTAAATT ATACAGATTT TAATAGTGAT 
ATGGATTCCT TTGTTAATTC AAACAATCTA GAAAGTAGCA CTGATTATCT TTTAGTAACT 
AATTTAAAAA CTAAATATAC TTATGTTTAT AAGAAGTCTA ATAATAAGTG GATAAGGAGC 
TATAAATGGA TTAGCACAGT AGGTAAGCCT TCTACACCTA CTAGAAAAGG AATTTTCTTT 
ATTAATGGAA GAAAGGCAGG ATTTTCTGGA GCAGATTATT CAGTAAAGTA TGCTACAAGA 
ATAGTGGATG GCTATTATTA TCACTCAATA TTATATGATA AGACTGGAAA GAATATAAAA 
GATGGTAGGC TTGGTGAGGC ATTAAGTCAT GGATGTATTA GACTTAATCC AGATAATGCT 
AAATGGATAT ATGATAATAT ACCAGATAAT ACTACGGTTT TAATAGCTTA G
 
Protein sequence
MDSNALKKYK SLNYTDFNSD MDSFVNSNNL ESSTDYLLVT NLKTKYTYVY KKSNNKWIRS 
YKWISTVGKP STPTRKGIFF INGRKAGFSG ADYSVKYATR IVDGYYYHSI LYDKTGKNIK 
DGRLGEALSH GCIRLNPDNA KWIYDNIPDN TTVLIA