Gene CPF_1451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1451 
Symbol 
ID4201077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1635096 
End bp1635869 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content28% 
IMG OID638082329 
Producthypothetical protein 
Protein accessionYP_695894 
Protein GI110800807 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00698749 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGAGTT TAGTTATTAA GTTTATTTCA ATTTTTTTAG GAATAATATG TATATTATAT 
TACATCTTAG TTAATGCTTT AAGTGGAAAA ACAACCTTTA GCTCTTTTTA TTTAATTTTA
GGAGTAGTCA TTATATTATA CACACTTTTT ATAAATAAGC TTTTAAAATT ACAGTGGTTT
AAAACGGTGT ACAAGCCTAT GAAGATTTTA GCTCTTATAT GCATAAGTAT ATTTATAATA
GTAGAGGGAG CAATAATTTT CTATCCTAAA AAATCCTTAA AACCTTGTGA TTATATAGTT
GTTTTAGGGG CTGGAATAAG GGGAGAAAAT TTAACCGCTA CATTAAGAGA CAGATTAGAT
AAGACCATAG AATATTTAGA GAAAACTGGA TTTAATGGAG AGATTGTAGT ATCTGGTGGA
CAAGGTCCTG GAGAAAGCAT AACTGAGGCT TATGCAATGG AAAAATATCT AGTGGAAAAT
GGAGTGCCAA AGGATAAAAT TGTACTTGAA AATAAAGCAA CTAGTACATA CGAAAATCTA
AATTATTCTA AGAAGATCAT AGAGAACTTA AGTGGAAAGC CTATAAAAGA CTTAGATATT
TTAATAGTTA CCACAGATTT TCATGCTATG AGAAGCAATC TTTTAGCTAA AAGAAATGGA
TATAATAAGG CTTATTTATA TACAAGTAAA ACTCAGTGGT ATTTAGTACC TTCTATGTAT
GCAAGAGAAT TTTTTGCTTT TTGTAAATCA TATTTTCTTG ATAAGAGAAT TTAG
 
Protein sequence
MKSLVIKFIS IFLGIICILY YILVNALSGK TTFSSFYLIL GVVIILYTLF INKLLKLQWF 
KTVYKPMKIL ALICISIFII VEGAIIFYPK KSLKPCDYIV VLGAGIRGEN LTATLRDRLD
KTIEYLEKTG FNGEIVVSGG QGPGESITEA YAMEKYLVEN GVPKDKIVLE NKATSTYENL
NYSKKIIENL SGKPIKDLDI LIVTTDFHAM RSNLLAKRNG YNKAYLYTSK TQWYLVPSMY
AREFFAFCKS YFLDKRI