Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1436 |
Symbol | cbiK |
ID | 4201299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1616204 |
End bp | 1617046 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638082316 |
Product | sirohydrochlorin cobaltochelatase |
Protein accession | YP_695881 |
Protein GI | 110799043 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4822] Cobalamin biosynthesis protein CbiK, Co2+ chelatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.181769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG CTATATTAGT AGTAAGTTTT GGAACAAGTC ATTTAGACGC ATTAAATAAT TCTATAAAGA AAATAGAAGA TTCAATACAG GAAAACTTTA AAGAATATGA TGTTTTTAGA AGTTTTACAT CACATATGAT AGTAAGAAAA CTTAAAGAAA AACATAACAT GGAAGTATTA TTTCCAGAGG ATGCTTTAAA GAAATTAGGA GAGGAAGGAT ATGAGGAAGT TATAGTTCAA CCACTTCATA TTATTCCAGG AGAAGAGTTT GATTATATAA AGCATATGGT AAAGGAATAT GAACCATGCT TTAAAAAGAT AGAAATAGGA AGACCAATAT TCCATTATGA AGGTTTTGAA TCAGGTCCAG ATGATTATTC ATATTTCGTA GATACAATGA AAGATTTAAT AGAAAAGAAT TCTCCATGTG TATTTGTTGG ACATGGTAGT GCTCATCCAT CAAATGCTGT TTATGGATGT TTACAATCTG TTTTAATAGA TAAGGACTAT GAAGATGTTT TTGTAGGAAC TGTAGAAGGG TATCCTAATT TTTCAAATGT CTTAAAGAAA GCTAAGAAGA AAGATATAAA AGAAATAACA ATAATTCCTT TAATGGTTGT AGCTGGAGAT CATGCTAAAA ATGATATGGC TTCAGATGAA GAAGATTCAT GGAAGAGCAG ATTTGAAAGT GAAGGAATAA AGGCTAATGT TATTTTAAAA GGCTTAGGAG AATACGAAGA GTTTGGAAAT TTATACATAG ATAGAATTAA TGATGTTATT AATGGTACAT ATAAAGGACT TGGAGAAACT AAAAAGAAGA AACATAGAAG GGAAATGAAA TAA
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Protein sequence | MKKAILVVSF GTSHLDALNN SIKKIEDSIQ ENFKEYDVFR SFTSHMIVRK LKEKHNMEVL FPEDALKKLG EEGYEEVIVQ PLHIIPGEEF DYIKHMVKEY EPCFKKIEIG RPIFHYEGFE SGPDDYSYFV DTMKDLIEKN SPCVFVGHGS AHPSNAVYGC LQSVLIDKDY EDVFVGTVEG YPNFSNVLKK AKKKDIKEIT IIPLMVVAGD HAKNDMASDE EDSWKSRFES EGIKANVILK GLGEYEEFGN LYIDRINDVI NGTYKGLGET KKKKHRREMK
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