Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1416 |
Symbol | |
ID | 4202844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1597100 |
End bp | 1599094 |
Gene Length | 1995 bp |
Protein Length | 664 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 638082296 |
Product | putative ATP-dependent DNA helicase PcrA |
Protein accession | YP_695861 |
Protein GI | 110799163 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAATT TAGATAAATA TCAAAATGAA GCTGTAAGAG CAAGGAGTAA AAGTGTCCTT GTTATAGCTC CACCAGGAGC AGGAAAGACC ACAGTAATAT TAAATAGAAT TAAATATCTT TTAGAAGAAA GAAAGGTTAA AGGAATACAT GTTATAGTAA TAACTTTTAC TAAGGCGGCA GCAGAAAATA TGAAAAGTAG ATTTAAAGAA ATGCATAAGG AAGGTGTTAT TCCATTCTTT GGAACCTTTC ATGGACTTTT TTATAAAATT TTACTTAGGA ATAAGGATGA AATAAGGCTT ATAGAGTCTA AAGATTCTTA TAATATTATA AGGAAAGTAT TATCCTCTTA TATAGAAGAG GTAAGTGATG AAAAAATAAA AGAGGTATTA AATAATATAT CTAGAAAGAA AGTTTCTTCT AAGGATTTAG AAATATCAAT GACTTATGAT ATTTTTAATA AATGCTATGA AGCATATGAA ACTTTTAAAA ATGAGAGAGG ACTTTTAGAT TTTGATGATT TACAAATAAA AGCAGTAACT CTTTTAAAAG AAAATCCTCA TATATTAGGA TATTATAGAA ATTTAATAAA ATATATATTA GTTGATGAGT TTCAAGATTG TGATGAAGTT CAATTAGAAT TTTTAAGACT TATAAATAAT GAAGTTTTTT GTGTTGGAGA TGAGGACCAA AGTATATATT CCTTTAGAGG AGCAACTCCT AAATGTATGA TAAACTTTGA GGAGAACTTT GAAGGTAGTG AGAAGGTTTA TTTAAAATAT AATTATAGAA GCTTAAAAAA TATTGTGGAG GTATCTAAGG ATGTTATAAA GCATAATAAA GAGAGATACC AAAAAGAAAT AATAGCTTTT AATGAAAATC AAGGTAAAAT AGAGCTTAAA AAGCCATTTA ATGAGTCTGA GGAAGCAAAT ATAATTGCTT TAAAAATAGA AGAAAGCAAA AGATTAGGGA ATAAATATTC TGATACTGCT ATTTTGTATA GAACAAATAT GGAGAGTAGA AGTTTTATTG ATGCCTTTAT TAGAAAAAAG ATTCCCTTTA AGCTTTTAGA TAAAGAGTAT AATTTCTTTA ATCATTTTAT ATGTAGAGAT TTAATTGCGT ATTTAAGACT CTCAATAGAT CCATTTAATA AAGAAGATTT TAATAAAATA ATAAACAAAC CCTTTAGATA TGTTTCAAAA AGCGCTATTT ATGGAGTGAT GAATTCTAAG AAGAAAGAAA ATGTTTTTGA TATATTAATG AATGTGGAAG GCGTACATCC ATTTCAAATG AGAAAGTTTG AGGAGCTAAA AAGTGACATA GCTTATTTAA ATAAACTTTC CTTAAATAGT GCTATTGATT TTATATTAAG TGATTTAGAG TATAGTCAGT ATATAAGAGA GTATTCCTCT AAATTTAAGC AAAATCAAGA GGATTTATTA GATATTGTAG AAGAATTTAA AAGTTCAGCT ATGGAATTTA AATCTATAAT CACTTTTCTT TCTCACATAG AAAGCGTTGA AGAAAATTTA GAAAACTTAA ATTCTAAAGG TAATATAGAC TCTGTTATAT TAAGCACCAT GCATGGGGTA AAGGGAATGC AGTTTAATGA TGTTCACATT GTAAATATAG TTGATGAAAC AATACCACAT AAAAACAGTA TGGAAAATTT AGAAGAGGAG AGAAGACTTT TTTATGTGGG TATAACTAGA GCCATAAATA ATTTATATCT TTATGCACCT AAAAGTGTAA GAGGTAAATT TAAGGAGCCA TCTATATTTT TAAATAATAC AAATCTAGAT AGCCAATGTA ATATAACTGA TTATGGATTA AAGGAAGGAG ATGTCATAAG ACATAATTAT TTTGGCATAG GTGAAATTTT AAAAATAGAG AAGGATACTA TTTCAATTAA ATTTATTCAA GGAGAAAATA AAAAATTTTC TTTAAGAACT TTGATTGAAA ATAATTTAAT AGAAAAAATA ATTTGTGAAG TTTAA
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Protein sequence | MSNLDKYQNE AVRARSKSVL VIAPPGAGKT TVILNRIKYL LEERKVKGIH VIVITFTKAA AENMKSRFKE MHKEGVIPFF GTFHGLFYKI LLRNKDEIRL IESKDSYNII RKVLSSYIEE VSDEKIKEVL NNISRKKVSS KDLEISMTYD IFNKCYEAYE TFKNERGLLD FDDLQIKAVT LLKENPHILG YYRNLIKYIL VDEFQDCDEV QLEFLRLINN EVFCVGDEDQ SIYSFRGATP KCMINFEENF EGSEKVYLKY NYRSLKNIVE VSKDVIKHNK ERYQKEIIAF NENQGKIELK KPFNESEEAN IIALKIEESK RLGNKYSDTA ILYRTNMESR SFIDAFIRKK IPFKLLDKEY NFFNHFICRD LIAYLRLSID PFNKEDFNKI INKPFRYVSK SAIYGVMNSK KKENVFDILM NVEGVHPFQM RKFEELKSDI AYLNKLSLNS AIDFILSDLE YSQYIREYSS KFKQNQEDLL DIVEEFKSSA MEFKSIITFL SHIESVEENL ENLNSKGNID SVILSTMHGV KGMQFNDVHI VNIVDETIPH KNSMENLEEE RRLFYVGITR AINNLYLYAP KSVRGKFKEP SIFLNNTNLD SQCNITDYGL KEGDVIRHNY FGIGEILKIE KDTISIKFIQ GENKKFSLRT LIENNLIEKI ICEV
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