Gene CPF_1416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1416 
Symbol 
ID4202844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1597100 
End bp1599094 
Gene Length1995 bp 
Protein Length664 aa 
Translation table11 
GC content26% 
IMG OID638082296 
Productputative ATP-dependent DNA helicase PcrA 
Protein accessionYP_695861 
Protein GI110799163 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAATT TAGATAAATA TCAAAATGAA GCTGTAAGAG CAAGGAGTAA AAGTGTCCTT 
GTTATAGCTC CACCAGGAGC AGGAAAGACC ACAGTAATAT TAAATAGAAT TAAATATCTT
TTAGAAGAAA GAAAGGTTAA AGGAATACAT GTTATAGTAA TAACTTTTAC TAAGGCGGCA
GCAGAAAATA TGAAAAGTAG ATTTAAAGAA ATGCATAAGG AAGGTGTTAT TCCATTCTTT
GGAACCTTTC ATGGACTTTT TTATAAAATT TTACTTAGGA ATAAGGATGA AATAAGGCTT
ATAGAGTCTA AAGATTCTTA TAATATTATA AGGAAAGTAT TATCCTCTTA TATAGAAGAG
GTAAGTGATG AAAAAATAAA AGAGGTATTA AATAATATAT CTAGAAAGAA AGTTTCTTCT
AAGGATTTAG AAATATCAAT GACTTATGAT ATTTTTAATA AATGCTATGA AGCATATGAA
ACTTTTAAAA ATGAGAGAGG ACTTTTAGAT TTTGATGATT TACAAATAAA AGCAGTAACT
CTTTTAAAAG AAAATCCTCA TATATTAGGA TATTATAGAA ATTTAATAAA ATATATATTA
GTTGATGAGT TTCAAGATTG TGATGAAGTT CAATTAGAAT TTTTAAGACT TATAAATAAT
GAAGTTTTTT GTGTTGGAGA TGAGGACCAA AGTATATATT CCTTTAGAGG AGCAACTCCT
AAATGTATGA TAAACTTTGA GGAGAACTTT GAAGGTAGTG AGAAGGTTTA TTTAAAATAT
AATTATAGAA GCTTAAAAAA TATTGTGGAG GTATCTAAGG ATGTTATAAA GCATAATAAA
GAGAGATACC AAAAAGAAAT AATAGCTTTT AATGAAAATC AAGGTAAAAT AGAGCTTAAA
AAGCCATTTA ATGAGTCTGA GGAAGCAAAT ATAATTGCTT TAAAAATAGA AGAAAGCAAA
AGATTAGGGA ATAAATATTC TGATACTGCT ATTTTGTATA GAACAAATAT GGAGAGTAGA
AGTTTTATTG ATGCCTTTAT TAGAAAAAAG ATTCCCTTTA AGCTTTTAGA TAAAGAGTAT
AATTTCTTTA ATCATTTTAT ATGTAGAGAT TTAATTGCGT ATTTAAGACT CTCAATAGAT
CCATTTAATA AAGAAGATTT TAATAAAATA ATAAACAAAC CCTTTAGATA TGTTTCAAAA
AGCGCTATTT ATGGAGTGAT GAATTCTAAG AAGAAAGAAA ATGTTTTTGA TATATTAATG
AATGTGGAAG GCGTACATCC ATTTCAAATG AGAAAGTTTG AGGAGCTAAA AAGTGACATA
GCTTATTTAA ATAAACTTTC CTTAAATAGT GCTATTGATT TTATATTAAG TGATTTAGAG
TATAGTCAGT ATATAAGAGA GTATTCCTCT AAATTTAAGC AAAATCAAGA GGATTTATTA
GATATTGTAG AAGAATTTAA AAGTTCAGCT ATGGAATTTA AATCTATAAT CACTTTTCTT
TCTCACATAG AAAGCGTTGA AGAAAATTTA GAAAACTTAA ATTCTAAAGG TAATATAGAC
TCTGTTATAT TAAGCACCAT GCATGGGGTA AAGGGAATGC AGTTTAATGA TGTTCACATT
GTAAATATAG TTGATGAAAC AATACCACAT AAAAACAGTA TGGAAAATTT AGAAGAGGAG
AGAAGACTTT TTTATGTGGG TATAACTAGA GCCATAAATA ATTTATATCT TTATGCACCT
AAAAGTGTAA GAGGTAAATT TAAGGAGCCA TCTATATTTT TAAATAATAC AAATCTAGAT
AGCCAATGTA ATATAACTGA TTATGGATTA AAGGAAGGAG ATGTCATAAG ACATAATTAT
TTTGGCATAG GTGAAATTTT AAAAATAGAG AAGGATACTA TTTCAATTAA ATTTATTCAA
GGAGAAAATA AAAAATTTTC TTTAAGAACT TTGATTGAAA ATAATTTAAT AGAAAAAATA
ATTTGTGAAG TTTAA
 
Protein sequence
MSNLDKYQNE AVRARSKSVL VIAPPGAGKT TVILNRIKYL LEERKVKGIH VIVITFTKAA 
AENMKSRFKE MHKEGVIPFF GTFHGLFYKI LLRNKDEIRL IESKDSYNII RKVLSSYIEE
VSDEKIKEVL NNISRKKVSS KDLEISMTYD IFNKCYEAYE TFKNERGLLD FDDLQIKAVT
LLKENPHILG YYRNLIKYIL VDEFQDCDEV QLEFLRLINN EVFCVGDEDQ SIYSFRGATP
KCMINFEENF EGSEKVYLKY NYRSLKNIVE VSKDVIKHNK ERYQKEIIAF NENQGKIELK
KPFNESEEAN IIALKIEESK RLGNKYSDTA ILYRTNMESR SFIDAFIRKK IPFKLLDKEY
NFFNHFICRD LIAYLRLSID PFNKEDFNKI INKPFRYVSK SAIYGVMNSK KKENVFDILM
NVEGVHPFQM RKFEELKSDI AYLNKLSLNS AIDFILSDLE YSQYIREYSS KFKQNQEDLL
DIVEEFKSSA MEFKSIITFL SHIESVEENL ENLNSKGNID SVILSTMHGV KGMQFNDVHI
VNIVDETIPH KNSMENLEEE RRLFYVGITR AINNLYLYAP KSVRGKFKEP SIFLNNTNLD
SQCNITDYGL KEGDVIRHNY FGIGEILKIE KDTISIKFIQ GENKKFSLRT LIENNLIEKI
ICEV