| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1409 |
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| Symbol | |
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| ID | 4203256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1586536 |
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| End bp | 1587918 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638082289 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_695854 |
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| Protein GI | 110799381 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.851568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAAAA AAGAAACAGA TTTAGGAAGG GATAGTATTG GAAAGCTCCT TTTTAAACTA
GCTATGCCAG CTATAATAGC TCAACTTGTT AATGTTTTAT ACAATATAGT AGATAGAATG
TTTATAGGAA GATTGCAATC TGGTGATATG GCTATGGCTG GAGTTGGGGT AGCCTTTCCA
ATTATAATGA TAGTCGCTGC TTTTAGTGGT TTAGTTGGTA TGGGAGGAGC TCCTTTAGCA
GCGATTAAAA TGGGAGAAAA GAAAAAAGAA GATGCTGAAG AAATAATGAC AAATAGTTTT
TCTGCACTTA TAGGATTAGC TTTATTTTTA ACAGTATTTT TCTTTATATT TAAGGAGCCA
ATTTTATGGG CCTTTGGGGC TAGTGATGCA ACTATAGGAT ATGCTTTAGA TTATTTAGGT
ATTTATTTAA TAGGTACTAT ATTTGTTCAA ATTGCCTTAG GAATGAATTC CTTTATAAAT
ACGCAAGGAT TTGCTAAGGT TGGAATGATA ACAGTTATGG TAGGAGCTGT AATAAATATT
GTATTAGATC CTATTTTAAT CTTTGGATTT AATATGGGAG TTAAGGGAGC AGCTTTAGCA
ACTATAATTG GTCAATGCGC CTCTGCTATA TGGGTATTAT ACTTTTTATT TGAAAAACAA
AGTATTCTTA GAATAAGAAA AAAATTCTTA AAGCCAAAAT TAAAAATATT ATTTTCAATA
ATGGCTTTAG GAGTATCTCC ATTTATAATG CAAGCTACTG AAAGTTTAGT CATAATAAGT
ATGAATAATA ATTTATTAAA GTATGGTGGA GACTTAGCCG TTGGAGCAAT GACTATTATG
AGTAGTGTAA TGCAAATAAT ATTACTTCCA TTAATGGGAC TTTCTCAAGG GGCACAACCT
ATAATAAGTT ATAACTATGG GGCTAATAAA GTCTATAGAG TAAAAAAGGC CTTTAAATTA
CTTTTAGTAT CATCAATGGT ATTTACCACA ATTATGTGGA GTGCATTAAT GATGTTACCA
GATGTGTTTG TAAAGATTTT TAATAGTAAT AATCCTCAAT TAATGGAGAT AACCTCATGG
AGTATTAAAA TATACTTTGC AGGTATTTTA CTTTTTGGTG CACAAGTTGC TTGCCAACAA
ACTTTCTTAG CTTTAGGACA AGCAAAGATA TCATTAATTT TAGCCTTACT TAGAAAGATT
GTGCTTTTAA TACCATTTAT ATATGTGCTT CCAATGGTTT TTGAAAATAA ACTTATGGGA
GTTCTTATGG CAGAACCTTT TGCAGATATA ATAGCAGCTC TATCAACAGT AACATGCTTT
ATTGTATTTT ATAAAAAACA TTTATCACAA GGTTTAGAAG AAGAAATAAA AGTAAATTCT
TAA
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| Protein sequence | MSKKETDLGR DSIGKLLFKL AMPAIIAQLV NVLYNIVDRM FIGRLQSGDM AMAGVGVAFP
IIMIVAAFSG LVGMGGAPLA AIKMGEKKKE DAEEIMTNSF SALIGLALFL TVFFFIFKEP
ILWAFGASDA TIGYALDYLG IYLIGTIFVQ IALGMNSFIN TQGFAKVGMI TVMVGAVINI
VLDPILIFGF NMGVKGAALA TIIGQCASAI WVLYFLFEKQ SILRIRKKFL KPKLKILFSI
MALGVSPFIM QATESLVIIS MNNNLLKYGG DLAVGAMTIM SSVMQIILLP LMGLSQGAQP
IISYNYGANK VYRVKKAFKL LLVSSMVFTT IMWSALMMLP DVFVKIFNSN NPQLMEITSW
SIKIYFAGIL LFGAQVACQQ TFLALGQAKI SLILALLRKI VLLIPFIYVL PMVFENKLMG
VLMAEPFADI IAALSTVTCF IVFYKKHLSQ GLEEEIKVNS
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