Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1400 |
Symbol | |
ID | 4201998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1572642 |
End bp | 1574138 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638082280 |
Product | amino acid permease family protein |
Protein accession | YP_695845 |
Protein GI | 110800640 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00116878 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTCAG AACATAAAAG TAAATTGTCT TTAACAGCGC TTATATTAAT GATTTTCACA TCAGTATATG GTTTTGCTAA CATGCCAAAG GCCTTTTATT TAATGGGATA TAGTGCTATT CCATGGTACA TAATATCAGC ATTAGCTTTC TCAATTCCAT ATGCTTTTAT GATGGCAGAA TATGGAGCAG CATTTAGAAA GGAAAGAGGG GGAATATACT CATGGATGGC TAAATCTGTA GGACCTAAAT ATGCCTTCAT AGTTACGTTC ATGTGGTATT CATCAAATTT AATATGGTTA GTTAGTAACT CATCATCAAT ATGGATTCCT TTCTCAAATG TTATATATGG AAAAGATACT ACAGGAACAT GGTCTTTACT TGGATTAAGT GTTCCACAGA CAATGGCTGT ATTAGGATCA ATACTTATAA TAGTTATAAC TTATGCAGCA TCTAAAGGAT TAAAGAGTAT AACAAAGGTT ACTTCAATTG GAGGAACTGT TGTTGCATTA TCAAATATAG TACTTATTTT AGGAGCAATT ATTGTTTTTG TAAGCAATGG ATTTAAACCA GCTGAGGTAA TAAATGGGTC TGCCTTTGTT CATGCACAAA ATCCATCTTA CCAATCACCA ATAGGTGTAT TAGGATTTTT AGTTTTTGCA GTTTTTGCTT ATGGTGGACT AGAAGCTGTA AGTGGATTAG TTGATGAAAC TAAGGATGCT AAAAAGAATT TTCCAAAGGG ATTAATGATT GCATCTATAA TAATAGCCGT TGGATATGCT GTTGGAATAC TTTGTGTTGG ATTATTTACA AATTGGCAAG AAGTATTATC AGGGGATAAT GTTAACTTAG CAAATGTAGC ATATATAGTA ATTCAAAACT TAGGTGTAAA ATTAGGTCAA GCTTTTGGCA TGAGTACTAA TGCTTCACTT CAATTAGGAG CTTGGTTTGC AAGATACATA GGTCTTTCAA TGATGTTAGC CTTAATGGGA GCTTTCTTTA CATTAAGTTA TGCACCTATT AAACAATTAA TAGAAGGAAC ACCTAAAGAA ATCTGGCCAA AAAAATGGAC TGTGTTAAAT GAAAATAACA TGCCAGTTAA TGCAATGTGG GTTCAATGTA TAGTTGTTGT TATATTTATA TTAGTAGCTT CTTTTGGTGG AGAATCTGCA AATAAATTCT TTAGTTATTT AATATTAATG GGTAATGTGG CCATGACAAT ACCATATATG TTCTTATCTG GAGCTTTCCC AGCATTTAAA AAGAAAAAAC ATATAGAAAA ACCATTTGTT ATGTATAAGT CATATAAATC ATCATTAATT TGGTCAATAA TAGTAACATT TACAATTGGA TTTGCAAATT TATTTACAAT AATAAAACCT GTTATTCAGG ATAAAGATTA TACAGCTATG GCATTCCAAA TAACTGGTCC AATAGTTTTT TCTATAATTG CTTTTATACT TTATCATAAT TATGAAAAGA AAATGAAAAA TAAATAA
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Protein sequence | MSSEHKSKLS LTALILMIFT SVYGFANMPK AFYLMGYSAI PWYIISALAF SIPYAFMMAE YGAAFRKERG GIYSWMAKSV GPKYAFIVTF MWYSSNLIWL VSNSSSIWIP FSNVIYGKDT TGTWSLLGLS VPQTMAVLGS ILIIVITYAA SKGLKSITKV TSIGGTVVAL SNIVLILGAI IVFVSNGFKP AEVINGSAFV HAQNPSYQSP IGVLGFLVFA VFAYGGLEAV SGLVDETKDA KKNFPKGLMI ASIIIAVGYA VGILCVGLFT NWQEVLSGDN VNLANVAYIV IQNLGVKLGQ AFGMSTNASL QLGAWFARYI GLSMMLALMG AFFTLSYAPI KQLIEGTPKE IWPKKWTVLN ENNMPVNAMW VQCIVVVIFI LVASFGGESA NKFFSYLILM GNVAMTIPYM FLSGAFPAFK KKKHIEKPFV MYKSYKSSLI WSIIVTFTIG FANLFTIIKP VIQDKDYTAM AFQITGPIVF SIIAFILYHN YEKKMKNK
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