Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1396 |
Symbol | |
ID | 4202290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1568823 |
End bp | 1569725 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 21% |
IMG OID | 638082276 |
Product | hypothetical protein |
Protein accession | YP_695841 |
Protein GI | 110800971 |
COG category | [S] Function unknown |
COG ID | [COG4866] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000166179 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAA AAATTACTTT AAAAGATAAA TCTCTTTACT ACCAATATAT AGATAAAAAC AAATTCCTAA GCTGTGAATA TTCTTTTGCT ACACTTTTTA TGTGGAAAGA CTTTAATGAT ATAGAATATG ATATAGTAAA TAATATTTTT ATTATTAAAA AATATGATAA AAATAATGGT AAATTTTTTA TGGAGCCTTT AGGGGATATA GATGATAATT CTTTAATAAA TATTATTGAC TATTTAGAAT CCATAAGAAA AAAAGAAAAG AGTAAATGGT TATTTGGAGA TGTAAGCATA AATTTTCTTA ATAGGTTAGA AGATATATAT AAAGAAAATT TAATTTTTGA GGAAGAAATA AATAACTTTG ATTATGTATA TAACTTTGAT GATTTAAGAA ATTTATCAGG AAGAAAATTT AGAAAGAAAA GAAATAAATA TAATCAGTTT ATTAAAAACT ATAATTATAA AACAGCATTT TTTAAAAGTT TTTTAGATAA TAAAGAAAGG GAAGAATGCT TAGAATTTTT AGATAAATGG TATTTAGAAA ATAAAGAAAT GGATGAGGAG TTTTTAGCTG AAATAGATGG AACAAGAAAT TTAATAAATT ATTTAGGCCA ATTAGACTTA GATTTAATAA AACTTTATGT GGACAATAAA TTAATAGGAA TTTCTATAGG GGAGAGATTT AATGATAGCA CATATATAGT TCATGTGGAG AAGTGTTTAA AAGAATTCAA AGGAGCCTAT GCTTTTATAA ATAATGAACT ATTAAAAAAT TATTTTTTAG ATTTAAAATA TGTTAATAGA GAAGAGGATT TAGGGATATT AGGATTAAAA AAATCAAAAA TGTCTTATAA TCCAAAGTTT TTTGAAAGAA AATATTTAGT TAAAATAAAG TGA
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Protein sequence | MFKKITLKDK SLYYQYIDKN KFLSCEYSFA TLFMWKDFND IEYDIVNNIF IIKKYDKNNG KFFMEPLGDI DDNSLINIID YLESIRKKEK SKWLFGDVSI NFLNRLEDIY KENLIFEEEI NNFDYVYNFD DLRNLSGRKF RKKRNKYNQF IKNYNYKTAF FKSFLDNKER EECLEFLDKW YLENKEMDEE FLAEIDGTRN LINYLGQLDL DLIKLYVDNK LIGISIGERF NDSTYIVHVE KCLKEFKGAY AFINNELLKN YFLDLKYVNR EEDLGILGLK KSKMSYNPKF FERKYLVKIK
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