Gene CPF_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1389 
Symbol 
ID4203159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1562304 
End bp1563401 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content32% 
IMG OID638082269 
Productphosphofructokinase family protein 
Protein accessionYP_695834 
Protein GI110799728 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0205] 6-phosphofructokinase 
TIGRFAM ID[TIGR02483] phosphofructokinase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACCAA TTAAGAAAAT AGCTATACTA ACAGGAGGAG GAGATTGTCC TGGATTAAAT 
GCAGTAATAA GAGCTGTAAC TAGAACTGCA ATCTTAAAAT ATGGATATGA AGTTATAGGT
TATAAATTTG GATATAGAGG TCTATATAAT AATGACTTTG TAAAATTGGA TCTTGATTCT
GTTTCTGGAA TACTTCATAG AGGAGGAACA ATACTTCATA GTTCAAATAA GGACAACCTA
TTTGATTATC AAGTTGAAGA TGAGAATGGT AAAATAGTTA AAAAAGATGT TTCTGATGTT
GGTGTTGAAA ACTTAAAGAA AGAAGAGGTA GATGCTCTAG TTGTTATTGG AGGAGATGGA
ACCTTAACCT CTGCAAGAGA TTTCGCAAGA AAAGGTGTTA ATGTAATAGG TGTTCCTAAA
ACAATAGATA ACGATTTATT AGCCACAGAT GTAACCTTTG GATTTAATAC TGCCACAGAA
ATAGCTACAG AAGCTTTAGA TAGACTTCAT ACTACAGCTG AGTCACATCA TAGAATAATG
CTTTTAGAAG TTATGGGAAG AAACGCTGGT TGGATTGCTT TAGAATCAGG AATAGCTGGT
TCTGCTGATG TAATATTATT ACCTGAAATA CCTTACGATA TAAACAAGAT AGTTGAAAAA
GTAAAAGAAA GAGAAGAAGC CGGAAAACAG TTTACAATTA TTGTAGTTGC AGAAGGAGCA
AAACCTAAAG ATGGAGAAGT AGTTGTTTCT AAAATAGTTG ATGATAGTCC AGACCCAATA
AGATTAGGGG GAATAGCTAA CAAATTAGCT ATTGACTTAG AAGGATTAAT AAAAAATCAT
GAAATAAGAA GCACTGTTCT TGGACATATA CAAAGAGGGG GAAATACCTC TACTTATGAT
AGAATACTTT CCACTAAATA TGGAGTTAAA GCTGTTGAAC TTATAAATAG TAATTTATTT
GGAAACATGG TTGCATTAAA AGGAAATAAA GTATCCTATG AAAGCTTAGA AAATGTAATT
GGACATACTA AAAATGTAGA TCCAGAAGGT GAATTAGTAA ACACTGCTAA AAGTATAGGA
ATTAGTTTCG CTGATTAA
 
Protein sequence
MQPIKKIAIL TGGGDCPGLN AVIRAVTRTA ILKYGYEVIG YKFGYRGLYN NDFVKLDLDS 
VSGILHRGGT ILHSSNKDNL FDYQVEDENG KIVKKDVSDV GVENLKKEEV DALVVIGGDG
TLTSARDFAR KGVNVIGVPK TIDNDLLATD VTFGFNTATE IATEALDRLH TTAESHHRIM
LLEVMGRNAG WIALESGIAG SADVILLPEI PYDINKIVEK VKEREEAGKQ FTIIVVAEGA
KPKDGEVVVS KIVDDSPDPI RLGGIANKLA IDLEGLIKNH EIRSTVLGHI QRGGNTSTYD
RILSTKYGVK AVELINSNLF GNMVALKGNK VSYESLENVI GHTKNVDPEG ELVNTAKSIG
ISFAD