Gene CPF_1384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1384 
SymbolpyrF 
ID4203558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp1557723 
End bp1558586 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content31% 
IMG OID638082265 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_695830 
Protein GI110800161 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.675621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGCTG ATAAATTATT TGAAAAAGTA GAAAAAAACG GAGTAGTTTG TGTTGGACTA 
GATACAAGCT TAGATTATAT ACCAGAGGAA TTTAAAAGTA AGTTTTCAAA TGAAAGCGAT 
ATGTTATTTG CCTTCAATAA AGAAATAATA GATGCAACAC TAGATGTATC TGCATGTTTT 
AAAGTTCAAA TAGCTTATTA TGAAGCCCTA GGTCTTAAGG GATTAGAGTC TTACAAAAAT 
ACTTTAAGTT ATTTAAGAGA AAAGAATGCT TTAATCATAG CTGATATAAA AAGAGGGGAT 
ATAGCTGCAA CGGCTAAAAT GTATGCAAAG GCTCACTTTG AAGGGGATTT TGAAAGTGAT 
TTTATAACTC TAAATCCATA TATGGGAATG GATAGCATAG ATCCATACTT ACCTTATATA 
GAAAAAAATG AAAAAGGAGT ATTTGTACTA GTAAGAACTT CAAATAAAGG AGCTGAAGAT 
ATAGAGTATC TAGAGGCTGG ACATGGAAAG AAAGTTTATG ATGTAGTTGG AGAAAAGTTA 
AATACTCTAG GAAAAAACTA TTTAGGAAAA CATGGTTATA GTTCAATAGG TGGAGTTGTA 
GGTTGTACTC ATCAAGAAGA AGCAAAAGAA ATGAGAGATA AATTAGATAC AATGCCATTT 
TTAATACCTG GATATGGTGC ACAGGGAGGA ACTGCTAAAG ATGTAGCAGC TTATCTTAAA 
AATGGAAATG GTGGAATTGT AAACTCTTCA AGAAAGATAC TATTAGCCTA TAAAGCTATG 
GAAGATAGTA AAAACTTTGC AGAATGTGCT AGAAAAGAAG CCATTTCAAT GAGAGACAGT 
ATAAGAGAAG CAATTTTAAA ATAG
 
Protein sequence
MIADKLFEKV EKNGVVCVGL DTSLDYIPEE FKSKFSNESD MLFAFNKEII DATLDVSACF 
KVQIAYYEAL GLKGLESYKN TLSYLREKNA LIIADIKRGD IAATAKMYAK AHFEGDFESD 
FITLNPYMGM DSIDPYLPYI EKNEKGVFVL VRTSNKGAED IEYLEAGHGK KVYDVVGEKL 
NTLGKNYLGK HGYSSIGGVV GCTHQEEAKE MRDKLDTMPF LIPGYGAQGG TAKDVAAYLK 
NGNGGIVNSS RKILLAYKAM EDSKNFAECA RKEAISMRDS IREAILK