Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1377 |
Symbol | xth |
ID | 4203280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1553235 |
End bp | 1553987 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638082258 |
Product | exodeoxyribonuclease III |
Protein accession | YP_695823 |
Protein GI | 110801105 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00689884 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAA TATCATGGAA TGTTAATGGC TTAAGAGCTT GTGTTAAAAA AGGCTTTTTA GATTACTTTA AATCTGAAGA TGCTGATATA TTCTGTCTAC AGGAGACTAA ACTTCAGGAA GGACAAATAG ATTTAGATCT AGAGGGATAT TTTCAATACT GGAACTATGC TGAGAAAAAG GGGTATTCAG GAACTGCAAT ATTCACTAAA AAAGAACCTC TAAATGTTTA TTATGGAATA AATATGGAGC ACCATGATAA GGAAGGAAGA GTTATAACTT TAGAATTTGA AGACTTGTTT ATGGTAACTG TTTATACTCC AAATTCACAA AGTGAACTTG CTAGATTAGA GTATAGAATG GAATGGGAAG ATGATTTTAG AAATTATCTT TTAGAGCTTT CATCTAAAAA AGGTGTAGTT GTATGTGGAG ATTTAAATGT AGCTCATAAG GAGATAGATT TAAAGAATCC TAAGACAAAT AGAAAGAATG CTGGCTTTAC AGATGAGGAA AGAGATAAAT TTTCTACATT ATTATCAAGT GGGTTTATAG ATACTTTCCG TTATTTCAAC CCAGACTTAG AGGGAGTTTA TTCTTGGTGG TCATATAGAT TTAATGCAAG AAAAAATAAT GCTGGATGGA GAATTGACTA TTTCTTAGTT TCAAATAATT TAGAAGATAG AATAAAAGAA GCTTCTATAG ACACTGAAAT ACTAGGGTCT GATCATTGCC CTGTTAAATT AATAATGGAA TAG
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Protein sequence | MKLISWNVNG LRACVKKGFL DYFKSEDADI FCLQETKLQE GQIDLDLEGY FQYWNYAEKK GYSGTAIFTK KEPLNVYYGI NMEHHDKEGR VITLEFEDLF MVTVYTPNSQ SELARLEYRM EWEDDFRNYL LELSSKKGVV VCGDLNVAHK EIDLKNPKTN RKNAGFTDEE RDKFSTLLSS GFIDTFRYFN PDLEGVYSWW SYRFNARKNN AGWRIDYFLV SNNLEDRIKE ASIDTEILGS DHCPVKLIME
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