Gene CPF_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1372 
Symbol 
ID4201813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp1550070 
End bp1550714 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content32% 
IMG OID638082253 
Producthypothetical protein 
Protein accessionYP_695818 
Protein GI110799244 
COG category[S] Function unknown 
COG ID[COG2364] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0000743481 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG AAAAACTTAT TCCTAAGCTT ATATTTTTCT TATTAGGAAT GGCAATCATA 
CAATTAGGTG TTGTAATATT CTTATTAAGC GGAGCTGGAT CAGACCCCTT TACTGTATTT 
ACTCAAGGAC TTTCAAAAGC TCTAAGCGTT TCAACTGGAA CTGCTAACAT GATAATACTT 
GTTACTTTAG TTATTGCAAT CTTCATTGCA GATAGAAAAC AACTTAAAGT TGGAACTTTT 
GTACTTGTTT TAGTTGTAGG CCCTACTATA GATGCAATCA TGGGAATATT ACATAGATTT 
GGTTTAGATA CTTCACTTAG TAACTTTAAC TTATTTACAA AATGCGTAAT TGTAGCTGTA 
AGCTGTATTA TAATAGCTAT AGGATTCTCA TTCTTAGTTA GTACTGAATT AGGAGTTGCA 
CCAAACGATT TAGTTCCTCT TATAATAAGA GATAAAACTA ACTTCCAATA CCGTTGGATA 
CGTATCGGTT TAGATTTAAG CTTCCTAGTA GTTGGTTATT TACTAGCTGG TGTTGTAGGT 
CTTGGAACAA TAATAGCAGT ACTTTTCACA GGTCCAGCTA TACAATTTTT TATGCCGCCA 
TGTGAAAAAA TTGTACATAA ATTTATAGGC AAAAATGCTG CTTAA
 
Protein sequence
MKKEKLIPKL IFFLLGMAII QLGVVIFLLS GAGSDPFTVF TQGLSKALSV STGTANMIIL 
VTLVIAIFIA DRKQLKVGTF VLVLVVGPTI DAIMGILHRF GLDTSLSNFN LFTKCVIVAV 
SCIIIAIGFS FLVSTELGVA PNDLVPLIIR DKTNFQYRWI RIGLDLSFLV VGYLLAGVVG 
LGTIIAVLFT GPAIQFFMPP CEKIVHKFIG KNAA