| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1368 |
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| Symbol | tdcB |
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| ID | 4201723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1544986 |
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| End bp | 1546194 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638082249 |
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| Product | threonine dehydratase |
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| Protein accession | YP_695814 |
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| Protein GI | 110799676 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR00260] threonine synthase
[TIGR01127] threonine dehydratase, medium form |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0833542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGATTATTT TGTATTTAGA AAAAATTATT AAAGCAAAAA AAAATATAGA AGATGTAGTT
ATAAAAACAC CTTTAATATA CAGCGAGGTT TTTTCAAGGA AATCTGGAAA CCAAGTGTAT
ATGAAATGTG AAAATTTACA ATTAACAGGT GCTTACAAAA TAAGAGGTGC CTTAAATAAA
ATAAGATCCT TATCAGATGA AGACAAAGCA AAAGGGGTTG TTTGCTCTTC TGCTGGAAAT
CATGCTCAAG GCGTAGCTTT TGCAGCATCA CAAGCTAATG TTAAATCAAC TATAGTAATG
CCAAAGACTA CTCCTCTACT AAAAATCCAA TCAACAAAGG ATTTAGGAGG AAATGTTGTT
TTATCAGGTT ATGTTTATGA TGATGCTTTT AATGAGGCTA AAAGAATTGA ACAGGAACAA
GGAGCCTTAT TTATACACCC ATTTAATGAT ATTGATGTAA TTTGTGGACA AGGCACAGTA
GCCTTAGAAA TATTTGAAGA TTTAAAGGAT GTAGATGTTA TTCTCTGCCC TATAGGTGGC
GGTGGCTTAA TAAGTGGAGT TACCTTAGCT GCTAAGGCCT TAAACCCTAA TGTTAAAGTA
ATTGGAGTAC AAGCAGAAGG GGCAAATGCA ATGGTTAAAA GTTTTAAGGC AGGAGAAATA
ATTGCTTTAG ACTCTGTTGA TACCATTGCT GACGGAATTG CAGTAAAAAG ACCTGGTGAT
TTAACATTTA AATTTATAAA AGAATATGTT GACGATATAA TAACTGTATC AGACCATGAA
ATTGTTGAAG CATTCTTTAC TTTAAGTGAA AAACATAAAC TTCTAGCAGA AGCTTCAGGA
GCTGTATCAT TAGCAGCCTC TTCTAAATTA AATTTTAAAG GTAAAAATGT AGTATCAATA
ATAAGTGGTG GTAATATAGA TATGGTTACT ATAACCGCAT TAATAAATAG TGCATTAGTA
GCTAAGGGAA GACTTTTTGG TTTTAGTCTA GAAGTTCCTC ATAAACCAGG CCAAATATTA
AAAATTGCTA AAGTTCTTGC TGATACTAAT GCTAATATAG TAAAACTTGA ACATGATCAT
TTTAAAGCAA CAGATGCTCT TAAGAACATG GTTATAGAAG TAACCTTAGA GACCAATGGC
CACTCTCATA TAGATGAAAT TAAAAAAGCT TTAACAGATC AAAACTATGT AATAAAACAA
ATTTACTAA
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| Protein sequence | MIILYLEKII KAKKNIEDVV IKTPLIYSEV FSRKSGNQVY MKCENLQLTG AYKIRGALNK
IRSLSDEDKA KGVVCSSAGN HAQGVAFAAS QANVKSTIVM PKTTPLLKIQ STKDLGGNVV
LSGYVYDDAF NEAKRIEQEQ GALFIHPFND IDVICGQGTV ALEIFEDLKD VDVILCPIGG
GGLISGVTLA AKALNPNVKV IGVQAEGANA MVKSFKAGEI IALDSVDTIA DGIAVKRPGD
LTFKFIKEYV DDIITVSDHE IVEAFFTLSE KHKLLAEASG AVSLAASSKL NFKGKNVVSI
ISGGNIDMVT ITALINSALV AKGRLFGFSL EVPHKPGQIL KIAKVLADTN ANIVKLEHDH
FKATDALKNM VIEVTLETNG HSHIDEIKKA LTDQNYVIKQ IY
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