| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1366 |
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| Symbol | xerC |
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| ID | 4202535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1542781 |
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| End bp | 1544133 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 25% |
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| IMG OID | 638082247 |
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| Product | site-specific tyrosine recombinase XerC |
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| Protein accession | YP_695812 |
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| Protein GI | 110799420 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000415693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATG AAGCGAATCA ATTCGAAAAT TTTAAATACT CACAAGAAAT CAAAGAATTA
CTGAATATAA ATTTAAGTAA TGATGACTTA AATAATCTTG ATCACATATA TAACTATTAC
GATTCTCAAA ACATCCAGCG TGACTATGAA GATTTAATTG AAGATATTTA TATTTTTATT
TTCAAGAGAA ATCTAAGTAT TACACAACTG GCAGAGATCT ATAAAGTTAA TCAAAGAATA
ATTAAACGAT GGTTAAAAGA ACTTGGAATG GACAAGCTTT TGGAAGTAGA AAAAGGTGTC
GATTCTGTTG AAAAATTAAA TTCTAAAAAT AACGAATCCG ATGAATTCCT TAAAAAGAAT
AAATTAAAAT TTGATTTTTT AGAGAAATCA AAGCATCCAA AAAGAGTTAT TGAATTCTTA
AATTACTTAG AAAATGTAAA AGGAAAATCC GTAAATACCA TAAAAGGATA CTCAGTTGAT
TTAGGATTAT TTTTTAAATT TTTAAAAGTT TATAAAGGTC TAGAAAATAA TATTGAATTA
GAAAAAATTG AAGAAGTTGA AATTTCTGAT TTAGGTGATA ATTTTATAAA GGATATAACC
TTATCTGATA TCTATGCATT TTTAGCTTTT TTAGAAAAAG TTAGAAACAA TAGCGCTTAT
GCCAGAGCTA GAAAAGTTGC TACTTTAAAA TCTTTCTTTA AGTTTTTAAA TTCTAAAATA
AAACTAATAG ATGAAAATCC TACAGTAGAA TTAGAATCTC CAAAGATAAA TAAAAGACAC
CCAGTTTATT TAACCTTAGA TCAAAGTATA ACTGTTTTAA ACTCTATGGA TAAAGAAAAT
AAAAATTATT ATAGAGATTA TTGTATACTA ACTTTATTTT TAAACTGCGG AATGAGATTA
TCTGAACTTT GTAATATTGA AATAGAAAAA ATCAAAGGAG ATACCTTAAC TATTATAGGT
AAAGGAAATA AAGAAAGAAC TGTTTATTTA AATGAAGCTT CAATTGCAGC TATAGAAAAC
TATTTGAAAA ATAGAAATGA TTCAAAAGCT ACTGAAGAAG CTAAAAAATA CTTATTTTTA
TCAAGTAAAT ATAGACCTAT AAATAAAAGA AGTGTTGAAA TTTTAGTGAA AAAACATATA
GAAAATGCAG GGTTTAAAGA TCAAAAATAT ACACCACATA AACTTAGACA CACAGCCGCC
ACCCTTATGT ATAAGTATGG TAATGTAGAT ATAAGAAGCT TGCAAAATAT ATTAGGTCAC
GAAAATATTT CAACAACTCA AATATATACC CATGTAGATG ATGAAACTTT AAGAGAAGCA
GTTAAAACTA ATCCTTTAGC AAATATAAAA TAG
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| Protein sequence | MNNEANQFEN FKYSQEIKEL LNINLSNDDL NNLDHIYNYY DSQNIQRDYE DLIEDIYIFI
FKRNLSITQL AEIYKVNQRI IKRWLKELGM DKLLEVEKGV DSVEKLNSKN NESDEFLKKN
KLKFDFLEKS KHPKRVIEFL NYLENVKGKS VNTIKGYSVD LGLFFKFLKV YKGLENNIEL
EKIEEVEISD LGDNFIKDIT LSDIYAFLAF LEKVRNNSAY ARARKVATLK SFFKFLNSKI
KLIDENPTVE LESPKINKRH PVYLTLDQSI TVLNSMDKEN KNYYRDYCIL TLFLNCGMRL
SELCNIEIEK IKGDTLTIIG KGNKERTVYL NEASIAAIEN YLKNRNDSKA TEEAKKYLFL
SSKYRPINKR SVEILVKKHI ENAGFKDQKY TPHKLRHTAA TLMYKYGNVD IRSLQNILGH
ENISTTQIYT HVDDETLREA VKTNPLANIK
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