Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1364 |
Symbol | lexA |
ID | 4203478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1541479 |
End bp | 1542090 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638082245 |
Product | LexA repressor |
Protein accession | YP_695810 |
Protein GI | 110801397 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000105475 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTATTA AGGAAAATTC AGATAAACAA ACTCAAATAT ATAACTTTTT AATTGAATTT ACAAAATCAA AGGGGTATCC ACCTTCAGTT AGAGAGATAT GTCAAGCAGT TAGCTTGAAA TCAACTTCAA CTGTTCATGG ACATTTAAAG AGATTAGAGA AAAAAGGATT AATATATAGA GATCCAACTA AGCCAAGAGC TTTAGAAATA GTAGAATTAT CTAACGAAGA AAAGGAATTA ATAGATATTC CTATAGTAGG TAAAGTTACT GCTGGTATGC CTATTTTAGC TACAGAGAAC ATAGAAGATA TGTTTCAAAT ACCGATAAAC TACGTTAAGC ACAATAATGA TTTATTTATT TTAAAAGTTA CTGGAGACAG TATGATAGAA GCCGGAATCT TAGATGGAGA TTTAGCAATA ATAGAACAGA AAAACGTAGC AACAAATGGT GATATTGTAG TAGCTCTAAT AGAAAATGAA GCTACCATAA AAAGATTTTT TAAGGAAAAT GGATTTATAA GACTACAACC AGAAAACAAA AACTATGAAC CTATAATAGT TGAAGATTGC TCTATTTTAG GTAAATTAGT AGGAATTTAT AGAGCTTATT AA
|
Protein sequence | MIIKENSDKQ TQIYNFLIEF TKSKGYPPSV REICQAVSLK STSTVHGHLK RLEKKGLIYR DPTKPRALEI VELSNEEKEL IDIPIVGKVT AGMPILATEN IEDMFQIPIN YVKHNNDLFI LKVTGDSMIE AGILDGDLAI IEQKNVATNG DIVVALIENE ATIKRFFKEN GFIRLQPENK NYEPIIVEDC SILGKLVGIY RAY
|
| |