Gene CPF_1362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1362 
Symbol 
ID4203176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1538855 
End bp1540135 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content31% 
IMG OID638082243 
Productaluminum resistance protein 
Protein accessionYP_695808 
Protein GI110799745 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4100] Cystathionine beta-lyase family protein involved in aluminum resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00883878 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAATG CAACTATAGA ATTACTAAAA AAACAATATG GTTTCACAGA TGAAACTATA 
AAGCTTTATA ATCAAGCTAT AATTGATGTA GAAAATGAAT TTAAAATATA TGATGAAATA
AGAGAATATA ATCAATTAAA AGTTCTTAAG GCTTTCCAAG AGGAAAGAAT TTCAGATAAT
CATTTTACTA ATTCAACAGG ATATGGTTAT GGTGATATTG GAAGAGACAC TTTAGATTTA
GTTTATGCTA GAATCTTTAA TGCTGAAAAA GCTTTAGTTA GACCACATTT TGTTAATGGA
ACTCATGCTT TAGGAACAGC TTTATTTGGA AACTTAAGAC CTGGAGATAC TATATTAGCT
GTTACTGGTA GCCCTTATGA TACTTTACAC AGTGTAATTG GTATAAGCGG AGAAGAAAAT
ATAGGCTCTT TAAAAGAGTA CGGTGTTAAT TATAAGCAAG TAGATCTTGT AGATGGAAAG
ATTAACATAA AAAAAGCTTT AGAAATGATT AAAGATGATG AATCAATAAA GTTAATACAT
ATGCAAAGAT CAACTGGATA CGGCTTTAGA AATGCCTTCC AAGTTAAAGA ATTAGGAGAA
GCAATAAAAG CTATAAAAGA ATTAAGAGAA GACTTAATAG TATTTGTTGA TAATTGTTAT
GGAGAGTTTA TAGACATAAT AGAACCTACA GATGTTGGTG CTGATTTAAT AGCAGGATCA
TTAATTAAAA ACATAGGTGG AGGAATAGCT CCAACTGGTG GATACATAGT AGGAAAAGAA
AAATATGTAG AGCAAGCATC TTATAGACTT ACTGTACCTG GTATAGGAGC TGAGTGTGGA
TGTACATTTG GAGTGATGAA AGATTTCTAC CAAGGATTAT TCTTAGCTCC TCATGTTGCT
ATAGAAGCAT TAAAAGGAGC AATATTCTGT GCTAGAATAA TGGAACTTGC TGGATTTGAA
GTTCTTCCTA AATATAATGA CAAGAGAAGT GACATAATTC AGGCTATAAA ATTCAATGAT
AAAGAAAAAC TTATAAAATT CTGTAAGGGT GTTCAATATG CTTCGCCAAT AGATTCTTTC
GTTGAATGTG AACCATGGGC TATGCCAGGG TATTCAGATG AGGTTATTAT GGCAGCTGGT
GCCTTCATTC AAGGTTCTTC TATAGAACTT TCAGCAGATG CACCTATAAG AGAGCCATAT
ATAGCTTATT TACAAGGTGG ATTAACTTTT GACCATGCTA AAATAGGTGT ATTAATAGCT
TTAAATAACA TTTTTAAATA A
 
Protein sequence
MLNATIELLK KQYGFTDETI KLYNQAIIDV ENEFKIYDEI REYNQLKVLK AFQEERISDN 
HFTNSTGYGY GDIGRDTLDL VYARIFNAEK ALVRPHFVNG THALGTALFG NLRPGDTILA
VTGSPYDTLH SVIGISGEEN IGSLKEYGVN YKQVDLVDGK INIKKALEMI KDDESIKLIH
MQRSTGYGFR NAFQVKELGE AIKAIKELRE DLIVFVDNCY GEFIDIIEPT DVGADLIAGS
LIKNIGGGIA PTGGYIVGKE KYVEQASYRL TVPGIGAECG CTFGVMKDFY QGLFLAPHVA
IEALKGAIFC ARIMELAGFE VLPKYNDKRS DIIQAIKFND KEKLIKFCKG VQYASPIDSF
VECEPWAMPG YSDEVIMAAG AFIQGSSIEL SADAPIREPY IAYLQGGLTF DHAKIGVLIA
LNNIFK