Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1358 |
Symbol | mutS |
ID | 4201810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1532731 |
End bp | 1535463 |
Gene Length | 2733 bp |
Protein Length | 910 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638082239 |
Product | DNA mismatch repair protein MutS |
Protein accession | YP_695804 |
Protein GI | 110799241 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.476923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTGA CTCCGATGAT GAGGCAATAT TTTGAGATAA AGGAAAATTA TAAGGATTGT ATTCTATTTT TTAGACTTGG AGACTTCTAT GAGATGTTCT TTGAGGATGC AGAAACAGCT GCAAGGGAAT TAGAATTAGT TCTTACTGGA AGAGATTGTG GCTTAGAAAA AAGAGCACCT ATGTGTGGAA TTCCGTTTCA TGCATCTAAT TCATATATAG GAAGATTAGT AGCTAAGGGG TATAAGGTTG CTATTTGTGA ACAAGTTGAA GATCCTAAAT TTGCTAAAGG AATTGTTAAA AGAGATGTTA TAAAGGTTAT AACTCCTGGA ACATATACAG ATTCTTCTTT TGTTGAGGAA ACAAAAAATA ATTATATAAT GACTATTTAT GCAGACTTAG AGAGAAATAG ATGTTCACTA GCTATAACAG ATATTTCTAC TGGAGATTTC TTAGCTACAG AGGGAGAATT AGAAAAGGGA GTTATTTTAG ATGAAATATC TAAGTTTAAT CCTAAAGAAA TAATACTTTT AGATTCTTTA GATCAAGAGC TTATAAAAGA TATAACATTA ACTACTCCAG CTTTAATAAG TAGAAAGCCT ATAGAATATT TTGAGGAAAA CTTTGAGGAA GTATTAAATA ATCAATTTGG AGAAAAATCA AACTCTCTAA GTTTAATGGT TAAGAAATCA AGTAATGCTT TAGTTAAATA CATACTAGAC ACTCAAAAAA TAAGCTTAAC CAATATAAAT GATATAGAAG TATATAGTTT GGTTGACTTT ATGACTATAG ATTTAAGTTC TAGAAGAAAT TTAGAGCTTA CAGAGAATCT AAGAGAAAAA AGCAAGAAGG GTTCTCTTCT TTGGGTATTA GATAAGACAG AAACTTCTAT GGGAAGTAGA ATGCTTAGAA GATGGATTGA AGAACCTCTT GTTAATAAGG AAAAGATAAC TTTAAGATTA AATGCTGTAG AAGAATTATT TAATGATCTT TCTTTAAATG ACTCTCTTAA GGAAGCTTTA CATGATATTT ATGATATAGA GAGAATATTA GGGAAAATTT CAAATAAAAA TGCTAATGCT AAGGATTTAA TAGCATTAAA AACATCTATA GGTAAAATTC CTAATGTAAA AGGAATTATA GAAAATTGCA CTTCAAGTCT TCTAAAGAAT TATCACCATA ATTTAGATGA CTTAAGAGAT ATTTATGATC TTTTAGAAAA ATCTATAAAA GAAGATCCAT CCCTAACATT AAAAGATGGT GATTTAATAA AAGATGGATT TAATGGTGAA ATAGATGAAT TAAGACTTGC TAAGACTAAC GGTAAGGATT GGATATCTAG CTTAGAAAAT AGAGAAAGAG AGTTTACTGG CATAAAATCT TTAAAGGTAG GATTTAATAA GGTCTTTGGT TATTATATAG AAATATCTAA GGCTAATTAT AGTTCTATTC CTGAAGGAAG ATATATAAGA AAGCAAACTT TAGCTAATGC AGAGAGATTT ATTACTCCAG AACTTAAGGA AATAGAAGAA AAACTTTTAG GAGCTAGTGA AAAACTTTGC TCTTTAGAAT ATGATATTTT CCTAGATATA AGAAATGAAG TTGAAAATCA TATAGATAGA CTAAAAACTA CTGCTAAGAT AATTGCTGAG TTAGATTGTA TAAGCAATTT AGCCTTTGTA GCTTTAGAAA ATGATTTTAT AAAACCTGAA ATTAATGAAG ATGGGGAAAC TAAAATAGAA AATGGAAGAC ACCCTGTTGT TGAAAAGGTA ATTCCTAAGG GAGAGTTTAT TCCTAATGAC ACTATTATAA ATAAAGATGA TAATCAACTT CTTATAATAA CAGGGCCTAA TATGGCTGGT AAATCAACAT ATATGAGACA GGTAGCTATT ATTACTTTAA TGTGTCAAAT AGGTTCCTTT GTGCCAGCTA GTAAGGCTAA TATAAGTGTA GTAGATAAAA TCTTTACTAG AATAGGAGCT TCTGATGATT TAGCAGGTGG TAAAAGTACA TTTATGGTTG AAATGTGGGA AGTTTCTAAC ATTTTAAAAA ATGCTACAGA AAATAGCTTG GTTCTTTTAG ATGAAGTTGG AAGAGGAACG AGTACATATG ATGGATTAAG TATAGCTTGG TCTGTTATAG AGTATATATG TAAAAATAAA AATTTAAGAT GTAAAACTCT TTTTGCTACT CATTATCATG AGTTAACTAA ATTAGAAGGA GAAATTCACG GAGTTAGAAA TTATTCAGTA GCTGTGAAGG AAGTTGATAA CAATATTATC TTCTTAAGAA AAATAATAGA AGGTGGAGCA GATCAATCTT ATGGTATTGA GGTTGCTAAA CTTGCTGGTA TTCCAGATGA GGTAATAAAT AGAGCTAAGG AAATCTTAGA AACTCTTGAA ATGGAATCTT CAAAGGATAA CTTAGATTTA GCTCTTAAAG AAGTAAATGC TTCAAAAGAA GACATAGAAG AAGCCTCTAT TACAACCTCT TATGAAGTTA AAGAAACCCT AGTAGAAGAG GATAAAATTG AAATTAAAGA AGAAGTTATT TCAAAAGCTT CAGAGGCTAA AACACATAAA AAAGAAGATG ATCAAATACA ATTAGATTTT TCTGCCATAG GAAAAGATAA TTTGATAAAA GAACTTTCAG AAGTTGATAT TTTATCTTTA AATCCTATGG AGGCTATGAA TAGATTATAT GCTCTAGTTA AAGAAGCTAA AAATTTAATT TAG
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Protein sequence | MKLTPMMRQY FEIKENYKDC ILFFRLGDFY EMFFEDAETA ARELELVLTG RDCGLEKRAP MCGIPFHASN SYIGRLVAKG YKVAICEQVE DPKFAKGIVK RDVIKVITPG TYTDSSFVEE TKNNYIMTIY ADLERNRCSL AITDISTGDF LATEGELEKG VILDEISKFN PKEIILLDSL DQELIKDITL TTPALISRKP IEYFEENFEE VLNNQFGEKS NSLSLMVKKS SNALVKYILD TQKISLTNIN DIEVYSLVDF MTIDLSSRRN LELTENLREK SKKGSLLWVL DKTETSMGSR MLRRWIEEPL VNKEKITLRL NAVEELFNDL SLNDSLKEAL HDIYDIERIL GKISNKNANA KDLIALKTSI GKIPNVKGII ENCTSSLLKN YHHNLDDLRD IYDLLEKSIK EDPSLTLKDG DLIKDGFNGE IDELRLAKTN GKDWISSLEN REREFTGIKS LKVGFNKVFG YYIEISKANY SSIPEGRYIR KQTLANAERF ITPELKEIEE KLLGASEKLC SLEYDIFLDI RNEVENHIDR LKTTAKIIAE LDCISNLAFV ALENDFIKPE INEDGETKIE NGRHPVVEKV IPKGEFIPND TIINKDDNQL LIITGPNMAG KSTYMRQVAI ITLMCQIGSF VPASKANISV VDKIFTRIGA SDDLAGGKST FMVEMWEVSN ILKNATENSL VLLDEVGRGT STYDGLSIAW SVIEYICKNK NLRCKTLFAT HYHELTKLEG EIHGVRNYSV AVKEVDNNII FLRKIIEGGA DQSYGIEVAK LAGIPDEVIN RAKEILETLE MESSKDNLDL ALKEVNASKE DIEEASITTS YEVKETLVEE DKIEIKEEVI SKASEAKTHK KEDDQIQLDF SAIGKDNLIK ELSEVDILSL NPMEAMNRLY ALVKEAKNLI
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