Gene CPF_1322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1322 
Symbol 
ID4203108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1500217 
End bp1500717 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content30% 
IMG OID638082203 
Productcytidine/deoxycytidylate deaminase family protein 
Protein accessionYP_695768 
Protein GI110801187 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2131] Deoxycytidylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAGCA AAAGAGAAGA TTATATTTCA TGGGATGAAT ATTTTATGGG AGTTGCATTA 
ATTAGTGCTA AAAGAAGTAA AGATCCAAAC ACTCAAGTTG GAGCTTGTAT AGTTGATAAT
GATAATAAAA TAGTAGGTAT TGGATACAAT GGTTTTCCTA AAGGATGTTC AGATGATGAT
CTGCCTTGGG GAAATAAGGG AGATTTTTTA GAAACAAAAT ATCCATATGC ATGTCATGCT
GAACTAAATG CTATTTTAAA TAGTACAGGT AAGAATGTTA AAAACTGCAG AGTATATGCT
ACTTTGTTCC CTTGTAATGA ATGTGCAAAG GCAATAATTC AAGCTGGGAT AACTGAAGTA
ATATACCTTT CAGATAAATA TAAGGATACT GACATTGTTA AGGCATCTAA ATTTATGTTT
GATAAAGCAA ATGTAAAATA TAGATACTTA GGAAGCAATA GAGAAAATTT ATTAATATCA
TTTAAGCCAG AGGATGTTTA A
 
Protein sequence
MISKREDYIS WDEYFMGVAL ISAKRSKDPN TQVGACIVDN DNKIVGIGYN GFPKGCSDDD 
LPWGNKGDFL ETKYPYACHA ELNAILNSTG KNVKNCRVYA TLFPCNECAK AIIQAGITEV
IYLSDKYKDT DIVKASKFMF DKANVKYRYL GSNRENLLIS FKPEDV