Gene CPF_1320 details

Gene Information

• Locus tag: CPF_1320
• Symbol: rnfA
• ID: 4202410
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 1498740
• End bp: 1499315
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 638082201
• Product: electron transport complex, RnfABCDGE type, A subunit
• Protein accession: YP_695766
• Protein GI: 110800105
• COG category: [C] Energy production and conversion
• COG ID: [COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA
• TIGRFAM ID: [TIGR01943] electron transport complex, RnfABCDGE type, A subunit

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATTAT TTCTGATTTT TATTGGAGCT ATGCTTGTTA ATAACTTTGT TTTATCACAA 
TTTTTAGGAA TATGTTCATT TATAGGAGTT TCAAAAAAGA AGGATGCTGC AGTAGGAATG 
GGACTTGCGG TTACCTTTGT AATGGTATTA GCTAGTATAA TTTCTTGGCT TGTTTATAAT 
CTTGTTTTAG ATAAATTTAA TATAACTTAT TTAAAAACAA TAGTTTTTGT TCTTGTTATA 
GCTTCCTTAG TTCAATTTGT GGAGATGGTT GTTAAAAAAT ATAGTCCTAG TTTATATAAA 
GCCTTAGGTA TATTTTTACC CTTAATAACT ACAAACTGCG CTGTTTTAGG AATGGCTGTT 
ACTAATGTGG AAGAAGGATA TAATCTTATT CAATCAATAG TACATGCTTT AGGGGCTGCT 
GGAGGATTTA TGCTTGCTAT AGTATTAATG TCATTTTTAA GAGAAAAAAT AGATGACAAT 
GAAGAAATAC ATCCATATTT TAGAGGATTA CCAATAACTC TTTTTACAGC AGCACTTATG 
TCTATTGCCT TTTTAGGATT CCAAGGACTT ATATAG 

 

Protein sequence

MELFLIFIGA MLVNNFVLSQ FLGICSFIGV SKKKDAAVGM GLAVTFVMVL ASIISWLVYN 
LVLDKFNITY LKTIVFVLVI ASLVQFVEMV VKKYSPSLYK ALGIFLPLIT TNCAVLGMAV 
TNVEEGYNLI QSIVHALGAA GGFMLAIVLM SFLREKIDDN EEIHPYFRGL PITLFTAALM 
SIAFLGFQGL I