| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1319 |
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| Symbol | rnfE |
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| ID | 4203765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1498041 |
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| End bp | 1498709 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638082200 |
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| Product | electron transport complex RsxE subunit |
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| Protein accession | YP_695765 |
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| Protein GI | 110800058 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
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| TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.175799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAAGTTT TATTTGAAAG ATTAAAAAAT GGTATAGTTA CTGAAAATCC TATATTTGTT
CAAGTATTAG CTATGTGTCC AACCCTAGCA GTTACTTCAA GTGTTGAAAA TGCCGTGGGC
ATGGGAATAG CTTCTACAGT GGTTTTAATT TTTTCTAATA TGATAATTTC AGCCTTAAGA
AAGTTTATAC CAAATAAAAT AAGAATTCCT GCATATATAG TTATAATTGC ATCCTTTGTT
ACTGTGGTTG ATATGTTAAT GAATGCTTAT GTTCAATCAT TATATAAATC CTTAGGAATT
TTCATACCTC TTATAGTAGT TAACTGCGTT ATATTAGGGA GAGCTGAGGC TTATGCTTCA
AATAACAAAA TCCTACCATC TATTTTTGAT GCCATTGGAA TGGGAATTGG ATTTACTATA
GCGTTATTTT CTATAGGAAC TTTTAGAGAA ATACTAGGTG CTGGAACATT TTTAGGAAAG
AGCATTATGC CAGAGGGATT TAAGCCAGCT ACTATTATGA TATTAGCTCC AGGTGCATTT
TTAACCTTAG GAGCATTAAT GACTTTCTTA AATTATAGAA ATATAAAGAA AGCTGAAAAG
CAAGGGAAAA AGGCTAAATG TTTAGAACAT AATTGTAGCA CTTGTTCTGG ATGCAGTAAA
AATTCTTAA
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| Protein sequence | MKVLFERLKN GIVTENPIFV QVLAMCPTLA VTSSVENAVG MGIASTVVLI FSNMIISALR
KFIPNKIRIP AYIVIIASFV TVVDMLMNAY VQSLYKSLGI FIPLIVVNCV ILGRAEAYAS
NNKILPSIFD AIGMGIGFTI ALFSIGTFRE ILGAGTFLGK SIMPEGFKPA TIMILAPGAF
LTLGALMTFL NYRNIKKAEK QGKKAKCLEH NCSTCSGCSK NS
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