Gene CPF_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1316 
Symbol 
ID4201724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1494574 
End bp1495524 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content29% 
IMG OID638082197 
ProductSPFH domain-containing protein/band 7 family protein 
Protein accessionYP_695762 
Protein GI110799677 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0215756 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGCTA CTGTAATTAT TATAATCTTA TTATTAATAG TGTTATTTGC AGCAATTTCA 
TCAATCAAGG TTGTAAATAC AGGATATGTT TATGTGTTAG AACGTTTTGG ACAATTTAGT
AAAATTTTAG AGCCAGGTTG GCATTTAGTT ATTCCTTTCG CTGACTTTGT AAGAAAGAAA
ATTTCAACAA AGCAACAAAT TCTAGATATA CCTCCACAAT ATGTAATAAC AAAAGATAAC
GTAAAAATTG AAATTGATAA TGTTATATTC TATAAAGTAT TAAACGCTAA AGATGCTGTT
TATAATATAG AAGATTTTAA ATCAGGTATA GTTTACTCAA CAATAACAAA CATGAGAAAC
ATAGTAGGTA ATATGTCTTT AGATGAAGTT TTATCAGGTA GAGATAAAAT AAACTTAGAG
CTTTTAACAA TAATAGATTC TATAACAGAT GCTTATGGTA TAAAGATACT TTCTGTAGAA
ATTAAAAATA TAATTCCTCC AGCTGAAATT CAAGATGCCA TGGAAAAACA AATGAAGGCA
GAAAGAGATA AGAGAGCTAC TATATTACAA GCTGAAGGTT TAAAACAAAG TGAAATAGCA
AGAGCAGAAG CTGAAAAGCA AGCTAAAATT TTAAGAGCTG AGGCTGAAAA AGAAGCTAAT
ATAAGACATG CTGAAGGTTT AAAAGAATCT CAATTACTTG AAGCTGAAGG TAAGGCTAGA
GCTATTGAAG AGGTTTCAAA GGCAGAAGCT GCAGCTATTG AAAGAATAAA TACTTCAATA
ATTGAATCTG GAACTAACGA AGTAGTAATT GCTTTAAAAC AAGTTGAAGC ATTAAAAGAA
ATGGCAGCTA ACCCAGCTAA TAAGCTTATT TTACCTAATG AAGCAGTTTC TTCTTTAGGA
AGTATAGCAG CTATTGCTGA TATTTTAAAA GAAAATAAAG AGAATAAATA A
 
Protein sequence
MVATVIIIIL LLIVLFAAIS SIKVVNTGYV YVLERFGQFS KILEPGWHLV IPFADFVRKK 
ISTKQQILDI PPQYVITKDN VKIEIDNVIF YKVLNAKDAV YNIEDFKSGI VYSTITNMRN
IVGNMSLDEV LSGRDKINLE LLTIIDSITD AYGIKILSVE IKNIIPPAEI QDAMEKQMKA
ERDKRATILQ AEGLKQSEIA RAEAEKQAKI LRAEAEKEAN IRHAEGLKES QLLEAEGKAR
AIEEVSKAEA AAIERINTSI IESGTNEVVI ALKQVEALKE MAANPANKLI LPNEAVSSLG
SIAAIADILK ENKENK