| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1313 |
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| Symbol | |
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| ID | 4202286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1490139 |
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| End bp | 1491560 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 638082194 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_695759 |
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| Protein GI | 110800967 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.010382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAT ATGATAAAAA ACTTAAAAAA GCGTTAGCTC AATATGAAAA TGGGAATTAT
GAAGAAGCAT TAGATATATG TGAAAAAGTA CTTGATAAGG ACTATAATAA CGAGGAAGCT
CTTACACTAG AAAGTAGAGC CCTTGAAAAG CTTAACAGAA TAAGCGACGC TATTGTTTCT
TGGAAAATAA ATGCTGAGTA TAATAACAAT GAGGAAGCTA GAACAAAACT TGATAAATTT
AATAATTTAG ATGAAAAAAA ACTAGCAATG AGTACTATAT TCAGTGAAAC TATGAAGGAT
GAAATTAAGG CTAGACTTCA AGAAGAAGCT CAAAAAGAAT ATGCTAAGCA ATTAGAAAAG
AGAGATTCTG AAATTAAGCC ATTACCTAAA GACACTGAAA AAGAGAAAGA AAACAAAAAG
GTTGAACAAG CTCCAGTTAT TAAGATAAAT AAAGAAAAAC CTAGAGAAGA TGTTAAGATT
GATGATATAA AACCATTAGA TCATAAAGCT AAAGAAACTT CAAAGACTGA AAGTAATCAT
CTTGATAATG TGACAAAGGT AGATTTCCAT AAAAAAGATG AAATTAAAAA ATCTAAAGAT
AAACCTAAGG ATGATAATGA ACCTAAAGTT ATTAGTACTC CTAATTTTAA AAACGAGAAA
TCTAACGCTA AAAAATCTAA CAAAAAGAAA CCAGTTAAGT ATATAGCTGT AGCTGTTTCA
GGTGCTATAG TTTTATTACT TGCTTATGGA GTAACAAAAA ATATAAAAAC TACAGATGCT
AGTAAAAATC AAATAACAGC AAGTGAAGAA GCTAATAATA ATGCTAACAA GACTGAAAAT
TCAACTGACA ATAAGACAAA TGAAGATTCA AAAAAAGAAA CTAAGACTAT TACTGCTGAT
GAATTAAATA AAGCTATTAG TAATAATGAT ATAAATTCTC TTTATACACT ATTAACTTCT
ACTCCTAAGG ATAAAGTACC TCAAGATGCC TTAGATGCTT ATAATAAAGC AGAAAATTTA
ATGAAAACTG ATGGGGTTAA GGATTTATAC CTAAAAGGAT CAGATTTATT TAAAGAGAAA
AAATATGAAG ATGCCCTTAA GGACTTTGAA AAAGCATATG CCTTTTCATC TGATTCTTAC
TTGAGACCTC ACTTAATTTA TTTCATGGGA ACTTCTTATG AAAACTTAGA TAAAAATACA
GAGGCAATCA AGTATTTCCA AGAATATTTA AAGGATTATA AGGCAAAACC AGATGCTGAA
GATTTTATGT ACACACCTCA ATGTTTATAT AACTTAGCTA TTTTATATAA TAAAGAAGGT
AACAGTGCTG AATCTAAAAA ATATGCGCAA GAAATTGAAA ATGATTATCC AAACACAATG
TTCTACAATG ATGTTACTAA AAAAATTATA TACGGTAATT AA
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| Protein sequence | MSKYDKKLKK ALAQYENGNY EEALDICEKV LDKDYNNEEA LTLESRALEK LNRISDAIVS
WKINAEYNNN EEARTKLDKF NNLDEKKLAM STIFSETMKD EIKARLQEEA QKEYAKQLEK
RDSEIKPLPK DTEKEKENKK VEQAPVIKIN KEKPREDVKI DDIKPLDHKA KETSKTESNH
LDNVTKVDFH KKDEIKKSKD KPKDDNEPKV ISTPNFKNEK SNAKKSNKKK PVKYIAVAVS
GAIVLLLAYG VTKNIKTTDA SKNQITASEE ANNNANKTEN STDNKTNEDS KKETKTITAD
ELNKAISNND INSLYTLLTS TPKDKVPQDA LDAYNKAENL MKTDGVKDLY LKGSDLFKEK
KYEDALKDFE KAYAFSSDSY LRPHLIYFMG TSYENLDKNT EAIKYFQEYL KDYKAKPDAE
DFMYTPQCLY NLAILYNKEG NSAESKKYAQ EIENDYPNTM FYNDVTKKII YGN
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