Gene CPF_1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1295 
Symbol 
ID4203832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp1467500 
End bp1468564 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content26% 
IMG OID638082176 
Productthreonine-phosphate decarboxylase 
Protein accessionYP_695741 
Protein GI110800703 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID[TIGR01140] L-threonine-O-3-phosphate decarboxylase
[TIGR01141] histidinol-phosphate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.806359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAG GACATGGTGG TAATGTAGAA GAAATTAAGA GGATTTATGG CTTAAAAGAA 
AATAAAATTA TTGATTTTTC AGCTAATATA AACCCCCTAG GAATCTCTGA AAGAGTAAAA 
GAGGCTATGG TAAGAGGAAT AAATTCTATA GAGAGATATC CAGATATAAC TTATTATGAG 
CTTAAAAAAG AAATTTCAAA CTTTGAAAAG GTAGCTTTAG AAAATATAGT TCTAGGAAAT 
GGTGCAGCAG AGGTTATTTT TAATATAGTA AGAGGAATAA AACCTAAAAA GGCCCTTATA 
GTAGCACCAA CCTTTTCAGA GTATGAGGAT GCTTTAAATT CTGTTGAGTG TGAAGTTAAC 
CATTATATAT TAAAAGATAA TTATTCAGTA GATAATGGAT TTTTAGAAGA AATCAAGGAA 
GAATTAGATA TTATATTTTT ATGCAATCCC AATAATCCTA CAGGTGCTTT AATAGAAAAA 
GATTTTTCAT TAAAAGTATT GGAAAAAGCA AAAAAAATGA ATATTACAGT TGTTTTTGAT 
GAATCTTTCT TAGACTTTGT TGAAGATAAT TATAGATACT CTCTTATTAA AGAACTTGAT 
AATTTCCAAA ATTTAATTAT AGTAAAATCT TTAACTAAAT TATTTGCCTT TCCTGGAATA 
AGATTAGGTT ATGGATTAAG TTCTAATAAT AATTTTATAG AAAAAATAAA TTCAGTAGGA 
ACTCCTTGGA GTGTAAATAC CGTAGCAGAC TATGCAGGAA GAGAAGCATT AAAAGATGTT 
AAGTATATTA AAAACAGCGT AGCTTACATA AAAAAAGAAA ATGAATTTTT ATATAATGGC 
CTAGAAAATT TTAAAGATAT TACTACTTTT AAAGGTGCAG TAAATTTTAT ATTTTTTAAA 
TTGAATAAAA ATATAAATTT AAGAGAAGAA TTAATTAGAA GAGGTATTAT AATAAGAAGT 
TGTAGTAATT ATATTGGCTT AGACCATAGC TTCTATAGGG TGGCAGTTAG AACAAGGGAA 
GAAAACAAAA AGCTTTTAGA AGAACTTTCA AAGGTTTTAA AATAA
 
Protein sequence
MNLGHGGNVE EIKRIYGLKE NKIIDFSANI NPLGISERVK EAMVRGINSI ERYPDITYYE 
LKKEISNFEK VALENIVLGN GAAEVIFNIV RGIKPKKALI VAPTFSEYED ALNSVECEVN 
HYILKDNYSV DNGFLEEIKE ELDIIFLCNP NNPTGALIEK DFSLKVLEKA KKMNITVVFD 
ESFLDFVEDN YRYSLIKELD NFQNLIIVKS LTKLFAFPGI RLGYGLSSNN NFIEKINSVG 
TPWSVNTVAD YAGREALKDV KYIKNSVAYI KKENEFLYNG LENFKDITTF KGAVNFIFFK 
LNKNINLREE LIRRGIIIRS CSNYIGLDHS FYRVAVRTRE ENKKLLEELS KVLK