Gene CPF_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1293 
Symbol 
ID4203798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp1465909 
End bp1466553 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content30% 
IMG OID638082174 
Productphosphoglycerate mutase family protein 
Protein accessionYP_695739 
Protein GI110799958 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.438434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAATTT ATTTAATTAG ACATGGGAAG ACTTATTGCA ATGAGAATAA ACTTTATTGT 
GGAATAAGTG ATGTGCCTTT AAGTGAGGAA GGAAAAAAAG AGTTAGAGGA AAAAAGAAAG 
AGTGTGAGTT TGCCAATATG TAAGAGAAAT TTTACAAGTG GAGCAAAAAG AGCTAATGAA 
ACATTTAATA TTTTATATCC AAATAAGAAG TATGAAGTCA TAAAGGAATT TGGTGAGTAT 
AATTTTGGAG ATTTTGAACT AAAGTCTTAT GAAATGCTAA AGGAAGACAA GGAATATTTA 
GACTGGATCT TAGATGAAAG CAAGGAAGTT TCATGTCCTA ATGGTGAATC AAGAAGGGAT 
TTTGAAAAGA GAATGAAAAA AGCATTTTTA AAATTACTTC TAACCCTTAA GAAAGAGGGA 
GAAGAGGAAG CTTTAATAGT ATGTCATGGA GGAAGTATAG CTTGTATTTT AGAACTCTTT 
GAAAAGGATA AATTAGACTT CTATACTTAT CAACCTAAGT GTGGAGGAGG ATATAAGTTA 
AAAGTTGAAC AGGATATCAA TAACTTAAAA GGAGATTTTT CAAGTCTAGA GTTTGAAAAA 
GACATAACAG ATAATTTAAG ACTAGAAATA ATAGAAAGGT TTTAG
 
Protein sequence
MIIYLIRHGK TYCNENKLYC GISDVPLSEE GKKELEEKRK SVSLPICKRN FTSGAKRANE 
TFNILYPNKK YEVIKEFGEY NFGDFELKSY EMLKEDKEYL DWILDESKEV SCPNGESRRD 
FEKRMKKAFL KLLLTLKKEG EEEALIVCHG GSIACILELF EKDKLDFYTY QPKCGGGYKL 
KVEQDINNLK GDFSSLEFEK DITDNLRLEI IERF