Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1278 |
Symbol | |
ID | 4201727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1452084 |
End bp | 1452551 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 22% |
IMG OID | 638082159 |
Product | putative lipoprotein |
Protein accession | YP_695724 |
Protein GI | 110799680 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00179006 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TTACTAAAAT ATTTTTAATA ACCCTATGTT TTTCTCTTCT TTTAATTTCA TGTTCTAAAA TTAATATTCC TTCTAAGGAA AAACCTTCTT TAAACTATCA CACTAAAAAT TTAAGTGAAC TAGTTTCTAA GAATAATATA AAAATCAGAT TATTAGATAT GAATATTTAT AGTGAAGTAA TTGTTGATAA TGAAGATGTA AGAATTATTG ATGACTTATT AAAAAGCTTA AAAGATTCTA ACTTTATAAA TGAGGAAGCT TTACCTAATA AACCCTTATA TAAAATTTTT ATAGATTTAA ATAGTGAAAA GTATGTAATA GATATTTACG GAGATGATTT AATAACCCTT TATCCTTGGG ATAGTGATGT AAGGAAGGAT TACTTAAGTT TAAAAGATAT TCCTAATTCC TTTAAATTAG AACCATTTTG CCAGTATGTG TTTAATAAAA AACAATAA
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Protein sequence | MKKITKIFLI TLCFSLLLIS CSKINIPSKE KPSLNYHTKN LSELVSKNNI KIRLLDMNIY SEVIVDNEDV RIIDDLLKSL KDSNFINEEA LPNKPLYKIF IDLNSEKYVI DIYGDDLITL YPWDSDVRKD YLSLKDIPNS FKLEPFCQYV FNKKQ
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