Gene CPF_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1278 
Symbol 
ID4201727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1452084 
End bp1452551 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content22% 
IMG OID638082159 
Productputative lipoprotein 
Protein accessionYP_695724 
Protein GI110799680 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00179006 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TTACTAAAAT ATTTTTAATA ACCCTATGTT TTTCTCTTCT TTTAATTTCA 
TGTTCTAAAA TTAATATTCC TTCTAAGGAA AAACCTTCTT TAAACTATCA CACTAAAAAT
TTAAGTGAAC TAGTTTCTAA GAATAATATA AAAATCAGAT TATTAGATAT GAATATTTAT
AGTGAAGTAA TTGTTGATAA TGAAGATGTA AGAATTATTG ATGACTTATT AAAAAGCTTA
AAAGATTCTA ACTTTATAAA TGAGGAAGCT TTACCTAATA AACCCTTATA TAAAATTTTT
ATAGATTTAA ATAGTGAAAA GTATGTAATA GATATTTACG GAGATGATTT AATAACCCTT
TATCCTTGGG ATAGTGATGT AAGGAAGGAT TACTTAAGTT TAAAAGATAT TCCTAATTCC
TTTAAATTAG AACCATTTTG CCAGTATGTG TTTAATAAAA AACAATAA
 
Protein sequence
MKKITKIFLI TLCFSLLLIS CSKINIPSKE KPSLNYHTKN LSELVSKNNI KIRLLDMNIY 
SEVIVDNEDV RIIDDLLKSL KDSNFINEEA LPNKPLYKIF IDLNSEKYVI DIYGDDLITL
YPWDSDVRKD YLSLKDIPNS FKLEPFCQYV FNKKQ