Gene CPF_1271 details

Gene Information

• Locus tag: CPF_1271
• Symbol: pabA
• ID: 4203934
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 1446556
• End bp: 1447146
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 638082152
• Product: anthranilate synthase component II
• Protein accession: YP_695717
• Protein GI: 110800842
• COG category: [E] Amino acid transport and metabolism; [H] Coenzyme transport and metabolism
• COG ID: [COG0512] Anthranilate/para-aminobenzoate synthases component II
• TIGRFAM ID: [TIGR00566] glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.8553
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTTTAA TGATAGATAA CTATGATTCC TTCGTGTTTA ATTTGCTTAG GTATTTTAAG 
GAATTAAATG AGGATATAAA GATAAAGAGG AATGATAAAA TAACTATAGA AGAAATAAAA 
AGATTGAATC CAGAGGGAAT AATAATATCT CCAGGACCTA AAGCACCTAA GGACATGAAA 
GAATGTTTAA ATATTATAGA GGAATTTAAG GGAAAGATTC CTATTTTAGG TGTATGTCTT 
GGTCACCAAT GTATTGGATA TTCCTTTGGA AGTAAAATAA AAAAAGGGGA TTTCCCAGTC 
CACGGAAAAG TGAGCAAAAT AACTCATGAC GGAAAAGGGA TTTTTAAGGG AATAAAAAAT 
AATATAAATG TAACTAGATA TCATTCTTTA GTAGTTGATA GAAATTTTTT AGGAGAAGAT 
TTAGAGATAA CTGCCTTAAG TGATGATGGG GTAGTTATGG GAATAAGGCA TAAAAGGTAC 
AATATAGAAG GAGTACAGTT TCATCCAGAG GCTGTTTTAA CTGAATATGG CCATGAAATG 
CTTAAAAATT TTATTGATAA TGCTAGGAAA TTTAATATTA TAGAAAGGTG A 

 

Protein sequence

MFLMIDNYDS FVFNLLRYFK ELNEDIKIKR NDKITIEEIK RLNPEGIIIS PGPKAPKDMK 
ECLNIIEEFK GKIPILGVCL GHQCIGYSFG SKIKKGDFPV HGKVSKITHD GKGIFKGIKN 
NINVTRYHSL VVDRNFLGED LEITALSDDG VVMGIRHKRY NIEGVQFHPE AVLTEYGHEM 
LKNFIDNARK FNIIER