| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1237 |
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| Symbol | |
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| ID | 4201861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1407519 |
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| End bp | 1408337 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 22% |
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| IMG OID | 638082118 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_695683 |
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| Protein GI | 110799001 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000177874 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTAATT ACATATATGA AAATCACTTT CATAGGGATC CTAATTTCCC AGTAATATTT
CATTGTGATA TTTTAAATAA AAATAAACCT AGTTTTTTGA TGCATTATCA TGAAAACATA
GAACTTCTCT ACTTCTTAGA TGGACATGCT AAGGTGGTTT GTGATAATAA AATACTCCAA
GCTAAAGCTG ATGATATTAT AATAATTAAT TCAAAGGAGC TGCATTCTAT AGAAAAAATA
TCTGATTACT GTAAATATTA CTGTCTTATT ATAGATAAAG ATTTACTTAA TGATAATTTA
AATAATTTTG ATAATTTTAG ATTTAAAAAC TTAATTAAGG ATTCATTTTT AAAGATGAAA
ATTGAAGAAA TAAATAGGGA ATTAAGTAAT AAAAATGATT ATTTTAAAGA ATTTATAAAA
TCGGATATAC TTCAAATTTT AATTCATATT AAGAGAAACC ATATTGAGCA AAACTCATCA
TTAATAAAAA TAAAAGATAA TAATAAAATA CTAATGGTAA AAGAAATAAT AAATTATTTA
AAAGAAAACT ATAAAGAACA AATTTCAATT GATCATATAT GTAACCATGT TGCTTTTAGT
AAATATTATA CCTGTCGTAC CTTTAAAGAG GTAACAGGGC AAACTATTCT AGATTATATT
AATCATATTA GATGTATTAA TGCTAGAAAT TTAATCCTCT ACAATGGATA TACTATATCT
GAAAGTGCTT ATAAAAGTGG CTTTAATAAC TTATCTTATT TTTCAAAAAC ATATAAAAAG
TATATAGGAT TACTTCCATC TGAAGAAAAA ATTACATAA
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| Protein sequence | MSNYIYENHF HRDPNFPVIF HCDILNKNKP SFLMHYHENI ELLYFLDGHA KVVCDNKILQ
AKADDIIIIN SKELHSIEKI SDYCKYYCLI IDKDLLNDNL NNFDNFRFKN LIKDSFLKMK
IEEINRELSN KNDYFKEFIK SDILQILIHI KRNHIEQNSS LIKIKDNNKI LMVKEIINYL
KENYKEQISI DHICNHVAFS KYYTCRTFKE VTGQTILDYI NHIRCINARN LILYNGYTIS
ESAYKSGFNN LSYFSKTYKK YIGLLPSEEK IT
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