| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1229 |
|---|
| Symbol | |
|---|
| ID | 4203217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 1399095 |
|---|
| End bp | 1399880 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 638082110 |
|---|
| Product | histidinol phosphate phosphatase family protein |
|---|
| Protein accession | YP_695675 |
|---|
| Protein GI | 110801334 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1387] Histidinol phosphatase and related hydrolases of the PHP family |
|---|
| TIGRFAM ID | [TIGR01856] histidinol phosphate phosphatase HisJ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.054354 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAGCA ATTATCATAC ACATACATAT AGATGTAATC ATGCCACAGG AACTATTGAA
GATTATGTTA AAGAAGCTAT AAAAGCTAAT ATAGATGAAA TTGGAATTTC TGATCACTTA
CCACATCCAG GTAAGAATAT AGATAATTAT CACAGAATGG CTTATGAAGA TTTAGAGGAT
TACTTTGGAA AGATAGAAGA AGCTATAGAA AAGTATGGAG ATAAAATATC AATAAAAAGA
TCCATAGAAT GCGAGTATTT CCCAGACTTC GGATGGCTTT ATGAAGAGCT AAAGGAGAAA
TATAAGGCAG ATTATTTAGC TTTAGGAGTA CATTTTTTCC CTTATAAAGG AGAATGGGTG
TATGTTGGAA CAATAGAATT AACGCCAGAA ATCCTAATGA TTTATGCTGA TTTTGTAGTG
GAAGCAATTA AGAGTGGATA TTTTTCATAT TTAGCTCATC CAGATTTATT TGGAATGACA
TATAGAAATT GGGATAAACA TGCAGAAGAG GCCTCAAAAA GAATTTTAAA AGCTGCAGAA
GAAATGGATA TGCCTATAGA AATAAATATA AATGGAATGA GAAGAAATAA ACTTTCTTAT
AATAATGGAG AAAGATATCA ATATCCAATA AAAGAGTTTT GGGAATTATC TAAGGAATAC
AATGTTAAAA GAATAGTTGG AATTGATGCT CATAATCCAG AAGAAATGCA TGATTTAGAT
ATGGGGTTAA ACTTTGCTAA AGAACATGAT TTAACTATTA TAGATAGATT AGAATTTAAT
AAATAA
|
|---|
| Protein sequence | MRSNYHTHTY RCNHATGTIE DYVKEAIKAN IDEIGISDHL PHPGKNIDNY HRMAYEDLED
YFGKIEEAIE KYGDKISIKR SIECEYFPDF GWLYEELKEK YKADYLALGV HFFPYKGEWV
YVGTIELTPE ILMIYADFVV EAIKSGYFSY LAHPDLFGMT YRNWDKHAEE ASKRILKAAE
EMDMPIEINI NGMRRNKLSY NNGERYQYPI KEFWELSKEY NVKRIVGIDA HNPEEMHDLD
MGLNFAKEHD LTIIDRLEFN K
|
|---|
| |