Gene CPF_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1228 
Symbol 
ID4201051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp1398237 
End bp1398857 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content23% 
IMG OID638082109 
Producthypothetical protein 
Protein accessionYP_695674 
Protein GI110799083 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0136245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAC AATATTTTGA AAAATTACTA AACATAAAAA CTTCTGGAGA ACAAAAAATA 
TTTAATGAAT CTCTACATTA CAATAGATAT GAACCTACAT CTTATGATGT ATTAGAAGCT 
ATGTGTTCTC AATATGAATT TTCTAAAGAA GATTCCTTAA TCGATTTTGG CTGTGGTAAA 
GGAAGACTTA ATTTCTATTT AAATTACTTT TTAAATATTA AAGTTACAGG AATAGAGATG 
AATAACTTTT TTTTTAATGA ATGCTTAGGA AATAAAAAAT CTTATTTATC ACAAAATAAA 
GTTAAGGAAG ATAAATTAAA TTTTATAAAT TGTTTTGCTG AAAGGTATCC TATAGATTCA 
AAGGATAATA AATTTTACTT TTTTAATCCC TTTTCAGAGC AAATATTTAT AAAAGTTGTT 
GGAAATATTC TTGATTCTGT ATCTAATCAT GAGAGACCAG TAGATATTAT ACTTTATTAT 
CCCTCTGATG ATTACATATA CTATTTAGAA AACTACACTC CATTTTCTTT AAAGAAGGAA 
ATAAAGATTC CTAATAAGTA TGAATATGAC TCAAGAGAAA AAATCCTTAT ATATGAACTT 
AGTTATTTAA ATTTAATATA A
 
Protein sequence
MKEQYFEKLL NIKTSGEQKI FNESLHYNRY EPTSYDVLEA MCSQYEFSKE DSLIDFGCGK 
GRLNFYLNYF LNIKVTGIEM NNFFFNECLG NKKSYLSQNK VKEDKLNFIN CFAERYPIDS 
KDNKFYFFNP FSEQIFIKVV GNILDSVSNH ERPVDIILYY PSDDYIYYLE NYTPFSLKKE 
IKIPNKYEYD SREKILIYEL SYLNLI