Gene CPF_1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1208 
Symbol 
ID4201233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1371401 
End bp1371832 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content25% 
IMG OID638082089 
ProductMarR family transcriptional regulator 
Protein accessionYP_695654 
Protein GI110798588 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0011677 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAT ATAATATTTT AAAGTTAGAA AACCAACTTT GTTTTAGATT ATATGCTTCT 
TCAAGAGAAG TTATAAAGAA ATATAAACCT ATTTTAGATC AATATAATTT AACTTATACA
CAATATTTAA CAATGCTTGT TTTGTGGGAA AATGAAAGAA TAACAGTTAA AGGGATTGGT
GAAAAATTGC ATCTTGATTC TGGAACTTTA ACACCTCTTA TAAAAAAGTT AGAAAAGATG
AATCTTGTAA CAAAATATAG ATCAAAAGAG GATGACAGAG TTGTAATAGT TGAATTAACA
GATGAGGGAA GAAATTTAAA AGATGATATG ATAGATGTGC CAAGAAAGGC TTTTTGTTCT
TTAGGAATAG AAAAAGAGCA AATATTAGAA CTTAAGAAAA ATTTAGACTC ATTACTAGAA
ATATTAAAAT AA
 
Protein sequence
MDKYNILKLE NQLCFRLYAS SREVIKKYKP ILDQYNLTYT QYLTMLVLWE NERITVKGIG 
EKLHLDSGTL TPLIKKLEKM NLVTKYRSKE DDRVVIVELT DEGRNLKDDM IDVPRKAFCS
LGIEKEQILE LKKNLDSLLE ILK