Gene CPF_1205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1205 
Symbol 
ID4201679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp1369560 
End bp1370174 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content27% 
IMG OID638082086 
ProductNUDIX family hydrolase 
Protein accessionYP_695651 
Protein GI110798626 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00320321 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATAAAT TATTAAAATG GGCTACTGAG ATAGATTCTA TTGCTCAAGC AGGATTAACT 
TACTCTAAAG ATGTGTATGA TATAGATAGA TTTAATCAAT TAAAGAATAT TGCAGCTGAT 
ATTATTAGTG AAAGTACTAA TTTAGAATTA CATAAAGTTA AGGAAGTTTT ATTTGAAGAA 
AGAGGATATT TAACCCCTAA GGTTGATGTA AGGGCTGCTA TAATAAAAGA AAATAAAATT 
TTATTGGTAA AAGAAAAATT AGATGGCACT TGGAGTTTGC CAGGAGGATG GGCTGATATA 
AACTTATCAG TATCTGAAAA CATAAAAAAA GAAGCATATG AGGAAGCGGG GGCAAAGGTT 
AAACCTAAAA GTATAATTGC AATTTTAGAT AGAAATAAAC ATAATAAACC TTTAATGGTT 
CAAAGTATTT ATAAAATTTT TATTCTTTGT GATCTTTTAG ATGTTAATTT TAATGATAAT 
ATTGAGACTG AGACATGTGG ATTTTTTGAA CTAAATAATC TTCCAAAGTT ATCTTTGACT 
AGAAATACAA AAGAACAAAT ACAGATGTGT TTTGAAGCAT ATAATAACCC AAGCTTTAAG 
CCTAAATTTG ATTAA
 
Protein sequence
MNKLLKWATE IDSIAQAGLT YSKDVYDIDR FNQLKNIAAD IISESTNLEL HKVKEVLFEE 
RGYLTPKVDV RAAIIKENKI LLVKEKLDGT WSLPGGWADI NLSVSENIKK EAYEEAGAKV 
KPKSIIAILD RNKHNKPLMV QSIYKIFILC DLLDVNFNDN IETETCGFFE LNNLPKLSLT 
RNTKEQIQMC FEAYNNPSFK PKFD