| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1202 |
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| Symbol | |
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| ID | 4203155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1367043 |
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| End bp | 1368245 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638082083 |
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| Product | triple helix repeat-containing collagen |
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| Protein accession | YP_695648 |
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| Protein GI | 110799319 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000183423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAGAA AAATTTATAA TCCTAATAGA TATTATGATG ATTACAATAG ATATAATTGT
TACGATAGAT ATAATTGCTA TGATGATGAG TATTGTCAAG ATGATTATTA TTGCAAGGAA
GACTGTTATT GTAAAGATGA TTGCTATTTA GAGATAAATT GCAATTGTTG CGATTGTTGT
AAACCTGGAC CAAGGGGTCC AAGAGGACCT CAAGGTCCTA GGGGTCCTCA AGGACCAAGA
GGTCCTATGG GATGTCAAGG TGAGCGTGGT CCAATAGGTC CTATGGGCCC TATGGGGCCT
ATTGGACCTC AAGGTCCACA AGGTGATCAA GGTCTTACTG GCCCTCAAGG CCCTGCTGGT
CCTCAAGGCG AACAAGGTCC ACAAGGTGAT CAAGGTCCTG TTGGTCCTAT AGGCCCTCAA
GGTCCTCAGG GTGAGCAAGG TCTTACTGGT CCTCAAGGAC CTGCTGGTTC TCAAGGCCCT
GAAGGTCCTA CTGGTCCTCA AGGTGCTACT GGCCCTCAAG GTCCTGAAGG TCCTACTGGT
GCTCAAGGAG ATCAAGGTCC TGTTGGTCCT CAAGGAGCTC AAGGTCCACA AGGCCCTCAA
GGTCCTCAAG GTGCTACCGG TCCTACTGGC CCACAGGGTC CTCAAGGTAA TCAAGGTCCT
GCTGGTCCTC AAGGCCCTGT TGGTCCTCAA GGTCCTCAAG GTGAACCTGG AGTGGATTTT
GATGATACCT TATTAGTTAG TTATTCCTCA TTAACTTCTC AAAATGTTAA TGCTAATGGT
ATATTCACTT ATAATATCCA AAATCCTAAT GGCTCAACTT TTACAGCAAT AACTGCCAAT
ATAGCAAACG GAACATTTAC AATAAATGAA CCTGGAAGAT ATTTATTTAT GTGGTCATTT
AATTTAGATA ACACAAATAA TACCACAGCT AGCGCTATAG TATCTTTATT TAGAAATGGT
TCTAGAGTAT TTTTATCTGG AACTCCTAGA GTAGCTCCTG GTGAAATAGG CGTAGTAAAT
GGAAGTATTG CCGTAAATGC TAATGCTGGT GATGTATTTG CTTTAGTTAA TAATTCTACA
AGAAACGTTT TATCACAAAT AATATCTTCA CCAATTTCTG TAACTCCAGC TATCTTAGGA
GAATCTACAG GAATAAATTC AGGAATAGGA TCTTGGGTTC AAATAGTTAG AGTATCTGAT
TAA
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| Protein sequence | MIRKIYNPNR YYDDYNRYNC YDRYNCYDDE YCQDDYYCKE DCYCKDDCYL EINCNCCDCC
KPGPRGPRGP QGPRGPQGPR GPMGCQGERG PIGPMGPMGP IGPQGPQGDQ GLTGPQGPAG
PQGEQGPQGD QGPVGPIGPQ GPQGEQGLTG PQGPAGSQGP EGPTGPQGAT GPQGPEGPTG
AQGDQGPVGP QGAQGPQGPQ GPQGATGPTG PQGPQGNQGP AGPQGPVGPQ GPQGEPGVDF
DDTLLVSYSS LTSQNVNANG IFTYNIQNPN GSTFTAITAN IANGTFTINE PGRYLFMWSF
NLDNTNNTTA SAIVSLFRNG SRVFLSGTPR VAPGEIGVVN GSIAVNANAG DVFALVNNST
RNVLSQIISS PISVTPAILG ESTGINSGIG SWVQIVRVSD
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