Gene CPF_1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1200 
Symbol 
ID4201312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1364725 
End bp1365642 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content31% 
IMG OID638082081 
Producthypothetical protein 
Protein accessionYP_695646 
Protein GI110798706 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0464187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA GAAATTTGGG TTTAGTTTTA GCTTTAACTA CAATATTGAC GACTGTATCA 
GTTCCACAAA AAGCATTAGG TTTTACAGAT AAGGTTTCTA ATGCACTATC TGAAATTCAA
AATCAAAGTG ATAACAGTGA AAATAATAAT TCAAGTGGGG GAGAGCAATT AAATACTCAA
ATAAGCAATA TTCAATCAAA GGATTTAATA ATAAGTTCAG TATCAATAGA TGAAGAAGTT
ATAGAGCCAG GAATACCATT TACATTAACC TTTAAAGTTG AAAATATAAG TGGAAGTAGT
CTATATGGAG TTTCTCTTAA AATTGTAAAT GTTGAGGGAA AAGGAACACT AGATGGATTC
ATGCCAGTTG GGACAACAAA TGAAATATAT GTAGGAAGCA TTGCACGTAA TGATATTAAA
TATGTTAGCG TGACTTTAGC AAGTGATCCT AATATAAAAG CTGGTGTACA CAATTTTGTT
ACTAGCCTTA TGTTTAATGA AAAAGGAAAA GAGCAAGAAG AAATAACAAA AGTTATAGGG
GTAATGATTC AGAACACTCC AAGTTTAAGT ATAAGTGGAG TTACTCCAAC TGAAAGTACT
ATTAGTGCTG CCTTAAGGAA TGATAGTAAA ACAAAAATAA AAAATGTAAA TGCTAAGGTT
ACTATAGGCA CTGAGGTCAT GGAACAAAAT ATAGGAACTA TTGATGTAGA AGGGGAGGAA
TATATGGATG TAGCAATAAC TCCTTCTGAA GAAGAAAGAA ATGCTTCCAT TGAAGTTACT
TATGAAGATG CTACAGGTAA GAAATATAAT TCAACAAGTT CATGTATTAT ACCAGCTATG
ATGCCTGTGG AAGAGACAGT ACCAAAAAAG AATAAATTAG GGTTAATATC ATTAATAAAG
AGTTTATTCG GATTTTAG
 
Protein sequence
MKKRNLGLVL ALTTILTTVS VPQKALGFTD KVSNALSEIQ NQSDNSENNN SSGGEQLNTQ 
ISNIQSKDLI ISSVSIDEEV IEPGIPFTLT FKVENISGSS LYGVSLKIVN VEGKGTLDGF
MPVGTTNEIY VGSIARNDIK YVSVTLASDP NIKAGVHNFV TSLMFNEKGK EQEEITKVIG
VMIQNTPSLS ISGVTPTEST ISAALRNDSK TKIKNVNAKV TIGTEVMEQN IGTIDVEGEE
YMDVAITPSE EERNASIEVT YEDATGKKYN STSSCIIPAM MPVEETVPKK NKLGLISLIK
SLFGF