Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1200 |
Symbol | |
ID | 4201312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1364725 |
End bp | 1365642 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638082081 |
Product | hypothetical protein |
Protein accession | YP_695646 |
Protein GI | 110798706 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0464187 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA GAAATTTGGG TTTAGTTTTA GCTTTAACTA CAATATTGAC GACTGTATCA GTTCCACAAA AAGCATTAGG TTTTACAGAT AAGGTTTCTA ATGCACTATC TGAAATTCAA AATCAAAGTG ATAACAGTGA AAATAATAAT TCAAGTGGGG GAGAGCAATT AAATACTCAA ATAAGCAATA TTCAATCAAA GGATTTAATA ATAAGTTCAG TATCAATAGA TGAAGAAGTT ATAGAGCCAG GAATACCATT TACATTAACC TTTAAAGTTG AAAATATAAG TGGAAGTAGT CTATATGGAG TTTCTCTTAA AATTGTAAAT GTTGAGGGAA AAGGAACACT AGATGGATTC ATGCCAGTTG GGACAACAAA TGAAATATAT GTAGGAAGCA TTGCACGTAA TGATATTAAA TATGTTAGCG TGACTTTAGC AAGTGATCCT AATATAAAAG CTGGTGTACA CAATTTTGTT ACTAGCCTTA TGTTTAATGA AAAAGGAAAA GAGCAAGAAG AAATAACAAA AGTTATAGGG GTAATGATTC AGAACACTCC AAGTTTAAGT ATAAGTGGAG TTACTCCAAC TGAAAGTACT ATTAGTGCTG CCTTAAGGAA TGATAGTAAA ACAAAAATAA AAAATGTAAA TGCTAAGGTT ACTATAGGCA CTGAGGTCAT GGAACAAAAT ATAGGAACTA TTGATGTAGA AGGGGAGGAA TATATGGATG TAGCAATAAC TCCTTCTGAA GAAGAAAGAA ATGCTTCCAT TGAAGTTACT TATGAAGATG CTACAGGTAA GAAATATAAT TCAACAAGTT CATGTATTAT ACCAGCTATG ATGCCTGTGG AAGAGACAGT ACCAAAAAAG AATAAATTAG GGTTAATATC ATTAATAAAG AGTTTATTCG GATTTTAG
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Protein sequence | MKKRNLGLVL ALTTILTTVS VPQKALGFTD KVSNALSEIQ NQSDNSENNN SSGGEQLNTQ ISNIQSKDLI ISSVSIDEEV IEPGIPFTLT FKVENISGSS LYGVSLKIVN VEGKGTLDGF MPVGTTNEIY VGSIARNDIK YVSVTLASDP NIKAGVHNFV TSLMFNEKGK EQEEITKVIG VMIQNTPSLS ISGVTPTEST ISAALRNDSK TKIKNVNAKV TIGTEVMEQN IGTIDVEGEE YMDVAITPSE EERNASIEVT YEDATGKKYN STSSCIIPAM MPVEETVPKK NKLGLISLIK SLFGF
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