Gene CPF_1199 details

Gene Information

• Locus tag: CPF_1199
• ID: 4203068
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 1364004
• End bp: 1364669
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 638082080
• Product: ABC transporter, ATP-binding protein
• Protein accession: YP_695645
• Protein GI: 110799273
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0191254
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAATTC AATGCAAAGA TATAAAGAAA ACATTTAAGG TTGGAGATAC TTCTGTTGAA 
ATTCTAAAGG GAATAAGTTT AGAAATTAAT AAGGGGGAAT TTACTGCAGT TATAGGAGAG 
TCAGGATCAG GAAAATCTAC ATTTTTAAAT ATTTTAGGAG GTATAATGCC TTGTGATGAA 
GGAGAAATAG TAATAAATGA ACATCATATT GAAGGCTTAA ATGAAAATGA ATTAGCTTTA 
TTTAGAAGAA AAAATATGGG GTTTATATTT CAAAGTTATA ATTTAATGCC TCAACTTACA 
GCTTTAGAAA ATGTAGAGAT GCCACTAATT TTTTCAGGAG TTTCTAAAAA GGAAAGAATA 
GAAAGAGCAA AATTAATGCT AGAAAAGGTT GGATTAGCTG ATAGGATGAA TCATAAACCA 
TCAGAATTAT CAGGGGGACA ACAACAAAGA GTATCTATAG CAAGAGCTTT AATAAATAAT 
CCAAGTGTAA TACTAGCTGA TGAGCCTACG GGGAATTTAG ATAGTAAGAC TACCATAGAA 
ATTTTAGATT TATTAAAGGA TTTAAATAAA AATTTTAATA CAACTTTTGT TGTGGTAACT 
CATTCACAAG TGGTTTATGA ATACGCAGAT AGAGTTATAA AAATGGAAGA TGGTCTTCTT 
TGCTAA 

 

Protein sequence

MIIQCKDIKK TFKVGDTSVE ILKGISLEIN KGEFTAVIGE SGSGKSTFLN ILGGIMPCDE 
GEIVINEHHI EGLNENELAL FRRKNMGFIF QSYNLMPQLT ALENVEMPLI FSGVSKKERI 
ERAKLMLEKV GLADRMNHKP SELSGGQQQR VSIARALINN PSVILADEPT GNLDSKTTIE 
ILDLLKDLNK NFNTTFVVVT HSQVVYEYAD RVIKMEDGLL C