Gene CPF_1178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1178 
Symbol 
ID4202134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1343562 
End bp1344074 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content30% 
IMG OID638082059 
Productputative ATP:cob(I)alamin adenosyltransferase 
Protein accessionYP_695624 
Protein GI110798903 
COG category[S] Function unknown 
COG ID[COG2096] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00636] ATP:cob(I)alamin adenosyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.341742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTT ACACTAAAAC TGGTGATAAA GGAACAACTT CTCTTTTCGG AGGAAGTAGA 
GTAGATAAAT GTGATTTAAG AGTAGATGCT TATGGAACAA TAGATGAATT AATATCTTTC
ATAGGTCTTG CTTATGCTGA ATTAACTGAT GAAGAAGAGA AGGAAATACT TAATAAAATA
CAAAAGGAAT TGTTCATGTT AGGAGCCGAG CTTGCTAGTG ATGAAAAAGG ACTTGAGCTT
TTAAAAGATA AAATCCAATT AGAGCATATA GAGTATTTAG AAAAATTAAT AGATAAATAC
ATGGGCATAG CAGGGCCTTT AACTGCCTTT GTTATACCAG GTAAAAATAA ACCTTCAGCA
ACTCTTCATG TAGCTAGAAC TGTAGCTAGA AGAGGAGAAA GAATAATGAC TGCTTTAAAC
GAAGTACAGC CATTAAGAGA AGAAATTAAA AAATATATAA ATAGATTATC AGATACTTTA
TTTGCATTAG CAAGATATTA TGAAGAAAAA TAA
 
Protein sequence
MNIYTKTGDK GTTSLFGGSR VDKCDLRVDA YGTIDELISF IGLAYAELTD EEEKEILNKI 
QKELFMLGAE LASDEKGLEL LKDKIQLEHI EYLEKLIDKY MGIAGPLTAF VIPGKNKPSA
TLHVARTVAR RGERIMTALN EVQPLREEIK KYINRLSDTL FALARYYEEK